WormBase Tree Display for Variation: WBVar02095969
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WBVar02095969 | Name | Public_name | WBVar02095969 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00826015 | |||||||
Y41C4A.4f.1:c.-49_-24delinsTATCGATAGGATCACATATTATTTTAA | ||||||||
Y41C4A.4e.1:c.391+1393_391+1418delinsTATCGATAGGATCACATATTATTTTAA | ||||||||
Y41C4A.4g.1:c.766+1393_766+1418delinsTATCGATAGGATCACATATTATTTTAA | ||||||||
Y41C4A.4d.1:c.466+1393_466+1418delinsTATCGATAGGATCACATATTATTTTAA | ||||||||
Y41C4A.4c.1:c.415+1393_415+1418delinsTATCGATAGGATCACATATTATTTTAA | ||||||||
Y41C4A.4b.1:c.454+1393_454+1418delinsTATCGATAGGATCACATATTATTTTAA | ||||||||
Y41C4A.4a.1:c.448+1393_448+1418delinsTATCGATAGGATCACATATTATTTTAA | ||||||||
HGVSg | CHROMOSOME_III:g.11689729_11689754delinsTATCGATAGGATCACATATTATTTTAA | |||||||
Sequence_details | SMap | S_parent | Sequence | Y41C4A | ||||
Flanking_sequences | ATCATCAGTTGACCGTATTATTATTATTAT | TTTTTTTTTGGTCTACAGTTTCAATGGAGT | ||||||
Mapping_target | Y41C4A | |||||||
Source_location | 225 | CHROMOSOME_III | 11689629 | 11689654 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TATCGATAGGATCACATATTATTTTAA | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000793 | ||||||
Transcript | Y41C4A.4e.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y41C4A.4e.1:c.391+1393_391+1418delinsTATCGATAGGATCACATATTATTTTAA | |||||||
Intron_number | 5/8 | |||||||
Y41C4A.4g.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y41C4A.4g.1:c.766+1393_766+1418delinsTATCGATAGGATCACATATTATTTTAA | |||||||
Intron_number | 3/6 | |||||||
Y41C4A.4b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y41C4A.4b.1:c.454+1393_454+1418delinsTATCGATAGGATCACATATTATTTTAA | |||||||
Intron_number | 4/6 | |||||||
Y41C4A.4a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y41C4A.4a.1:c.448+1393_448+1418delinsTATCGATAGGATCACATATTATTTTAA | |||||||
Intron_number | 5/8 | |||||||
Y41C4A.4d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y41C4A.4d.1:c.466+1393_466+1418delinsTATCGATAGGATCACATATTATTTTAA | |||||||
Intron_number | 5/8 | |||||||
Y41C4A.4f.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y41C4A.4f.1:c.-49_-24delinsTATCGATAGGATCACATATTATTTTAA | |||||||
cDNA_position | 218-243 | |||||||
Exon_number | 1/6 | |||||||
Y41C4A.4c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y41C4A.4c.1:c.415+1393_415+1418delinsTATCGATAGGATCACATATTATTTTAA | |||||||
Intron_number | 4/6 | |||||||
Method | WGS_Flibotte |