WormBase Tree Display for Variation: WBVar02103525
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WBVar02103525 | Name | Public_name | WBVar02103525 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00833834 | |||||||
Y54G2A.26c.1:c.960-402_960-398delinsTCAATC | ||||||||
Y54G2A.26b.1:c.1629-402_1629-398delinsTCAATC | ||||||||
Y54G2A.26a.1:c.1815-402_1815-398delinsTCAATC | ||||||||
HGVSg | CHROMOSOME_IV:g.2987138_2987142delinsGATTGA | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | AATCAAAAGTTCGGCCACCGATTTTTTTTA | TTTTAATGATTTTTAGGAAATTTTCAGTCG | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2987136 | 2987140 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | GATTGA | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021890 | ||||||
Transcript | Y54G2A.26b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.26b.1:c.1629-402_1629-398delinsTCAATC | |||||||
Intron_number | 6/6 | |||||||
Y54G2A.26a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.26a.1:c.1815-402_1815-398delinsTCAATC | |||||||
Intron_number | 8/9 | |||||||
Y54G2A.26c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.26c.1:c.960-402_960-398delinsTCAATC | |||||||
Intron_number | 4/4 | |||||||
Method | WGS_Flibotte |