WormBase Tree Display for Variation: WBVar02125172

WBVar02125172 Name: Public_name: tm6507
    Other_name: F10D7.5b.1:c.32-187_218+30delinsGC
      F10D7.5a.1:c.32-187_218+30delinsGC
      F10D7.5e.1:c.32-187_218+30delinsGC
    HGVSg: CHROMOSOME_X:g.17388914_17389368delinsGC
  Sequence_details: SMap: S_parent: Sequence: F10D7
    Flanking_sequences: gcatttgtttttggctcagtccttaggctc tttcttcaaattttttttgacagttgtcat
    Mapping_target: F10D7
    Source_location: 7 CHROMOSOME_X 17388913 17389369 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: GC
      Deletion
    PCR_product: tm6507_external
      tm6507_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 6507
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00017342
    Transcript: F10D7.5e.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F10D7.5e.1:c.32-187_218+30delinsGC
        Intron_number: 1-3/5
        Exon_number: 2-3/6
      F10D7.5a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F10D7.5a.1:c.32-187_218+30delinsGC
        Intron_number: 2-4/14
        Exon_number: 3-4/15
      F10D7.5b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F10D7.5b.1:c.32-187_218+30delinsGC
        Intron_number: 1-3/6
        Exon_number: 2-3/7
  Isolation: Mutagen: TMP/UV
  Genetics: Map: X
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 31086/31087-GC-31541/31542 (455 bp deletion + 2 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele