WormBase Tree Display for Variation: WBVar02125230

WBVar02125230 Name: Public_name: tm6560
    Other_name: T14F9.1.2:c.65_178-17del
      T14F9.1.1:c.65_178-17del
    HGVSg: CHROMOSOME_X:g.2237977_2238180del
  Sequence_details: SMap: S_parent: Sequence: T14F9
    Flanking_sequences: tcgacatgctcaacgcaacgtctcgtcttc tatgtataaattttagtcgaaagaagagcg
    Mapping_target: T14F9
    Source_location: 7 CHROMOSOME_X 2237976 2238181 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm6560_external
      tm6560_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 6560
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00020507
    Transcript: T14F9.1.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T14F9.1.1:c.65_178-17del
        cDNA_position: 67-?
        CDS_position: 65-?
        Protein_position: 22-?
        Intron_number: 2-3/9
        Exon_number: 2-3/10
      T14F9.1.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T14F9.1.2:c.65_178-17del
        cDNA_position: 67-?
        CDS_position: 65-?
        Protein_position: 22-?
        Intron_number: 2-3/10
        Exon_number: 2-3/11
  Isolation: Mutagen: TMP/UV
  Genetics: Map: X
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal or sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal or sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 32960/32961-33164/33165 (204 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele