WormBase Tree Display for Variation: WBVar02132146
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WBVar02132146 | Evidence | Paper_evidence | WBPaper00045317 | ||
---|---|---|---|---|---|
Name | Public_name | h5956 | |||
Other_name | CE54103:p.Ser561= | ||||
CE30134:p.Ser524= | |||||
F47D12.1b.1:c.1560+123G>A | |||||
F47D12.1e.1:c.720+123G>A | |||||
F47D12.1a.1:c.1572G>A | |||||
F47D12.1c.1:c.1683G>A | |||||
HGVSg | CHROMOSOME_III:g.6319579G>A | ||||
Sequence_details (6) | |||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00023685 | ||||
Laboratory | KR | ||||
Analysis | WGS_Rose | ||||
Status | Live | ||||
Affects | Gene | WBGene00001518 | |||
Transcript | F47D12.1b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F47D12.1b.1:c.1560+123G>A | ||||
Intron_number | 11/12 | ||||
F47D12.1e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F47D12.1e.1:c.720+123G>A | ||||
Intron_number | 6/7 | ||||
F47D12.1a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F47D12.1a.1:c.1572G>A | ||||
HGVSp | CE30134:p.Ser524= | ||||
cDNA_position | 1615 | ||||
CDS_position | 1572 | ||||
Protein_position | 524 | ||||
Exon_number | 12/14 | ||||
Codon_change | tcG/tcA | ||||
Amino_acid_change | S | ||||
F47D12.1c.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F47D12.1c.1:c.1683G>A | ||||
HGVSp | CE54103:p.Ser561= | ||||
cDNA_position | 1728 | ||||
CDS_position | 1683 | ||||
Protein_position | 561 | ||||
Exon_number | 11/13 | ||||
Codon_change | tcG/tcA | ||||
Amino_acid_change | S | ||||
Reference | WBPaper00040589 | ||||
WBPaper00000975 | |||||
WBPaper00003985 | |||||
WBPaper00000699 | |||||
WBPaper00045317 | |||||
Method | WGS_Rose |