WormBase Tree Display for Sequence: F48B9
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| F48B9 | DNA | F48B9 | 40015 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00018590 | 16616 | 17301 | |
| WBGene00018587 | 34120 | 39086 | ||||
| WBGene00018592 | 22697 | 21900 | ||||
| WBGene00018589 | 18283 | 27272 | ||||
| WBGene00197780 | 5681 | 5880 | ||||
| WBGene00195725 | 6975 | 6820 | ||||
| WBGene00018591 | 3338 | 511 | ||||
| WBGene00201092 | 8891 | 9030 | ||||
| WBGene00202146 | 6820 | 6962 | ||||
| WBGene00018593 | 29643 | 27122 | ||||
| CDS_child (144) | ||||||
| Transcript | F48B9.9 | 6975 | 6820 | |||
| F48B9.10 | 5681 | 5880 | ||||
| F48B9.11 | 8891 | 9030 | ||||
| F48B9.12 | 6820 | 6962 | ||||
| F48B9.t1:wp112 | 28821 | 28961 | ||||
| F48B9.1.1 | 34120 | 39086 | ||||
| F48B9.3.1 | 18283 | 27272 | ||||
| F48B9.4.1 | 16616 | 17301 | ||||
| F48B9.5.1 | 3338 | 511 | ||||
| F48B9.8.1 | 29643 | 27122 | ||||
| Transposon | WBTransposon00000319 | 23807 | 25142 | |||
| WBTransposon00000676 | 22697 | 21900 | ||||
| PCR_product | cenix:113-f12 | 15766 | 17263 | |||
| cenix:121-b5 | 18164 | 19077 | ||||
| cenix:124-e9 | 27977 | 28584 | ||||
| cenix:129-c12 | 895 | 1511 | ||||
| cenix:166-e5 | 22423 | 22744 | ||||
| cenix:197-h2 | 21854 | 22003 | ||||
| cenix:51-h9 | 25963 | 26758 | ||||
| cenix:66-d6 | 33864 | 34633 | ||||
| mv_F48B9.1 | 34131 | 39084 | ||||
| mv_F48B9.2 | 26090 | 27067 | ||||
| mv_F48B9.3 | 18342 | 19169 | ||||
| mv_F48B9.4 | 16497 | 16997 | ||||
| mv_F48B9.5 | 948 | 2483 | ||||
| mv_F48B9.6 | 21902 | 22165 | ||||
| mv_F48B9.7 | 22430 | 22696 | ||||
| mv_F48B9.8 | 27263 | 29620 | ||||
| mv_F48B9.a | 37442 | 37782 | ||||
| p_F48B9.1_93 | 32130 | 34129 | ||||
| p_F48B9.5_93 | 2485 | 4484 | ||||
| sjj_F48B9.1 | 34201 | 35753 | ||||
| sjj_F48B9.2 | 25355 | 27032 | ||||
| sjj_F48B9.3 | 18341 | 19211 | ||||
| sjj_F48B9.4 | 16104 | 17086 | ||||
| sjj_F48B9.5 | 789 | 2432 | ||||
| sjj_F48B9.6 | 21172 | 22217 | ||||
| sjj_F48B9.7 | 22382 | 23566 | ||||
| sjj_F48B9.8 | 27310 | 29585 | ||||
| Allele (586) | ||||||
| Oligo_set | Aff_F48B9.1 | 36313 | 39085 | |||
| Aff_F48B9.2 | 26469 | 27068 | ||||
| Aff_F48B9.3 | 18341 | 19170 | ||||
| Aff_F48B9.4 | 16496 | 16999 | ||||
| Aff_F48B9.5 | 2436 | 946 | ||||
| Aff_F48B9.6 | 22165 | 21899 | ||||
| Aff_F48B9.7 | 22696 | 22427 | ||||
| Aff_F48B9.8 | 28630 | 27260 | ||||
| Feature_object (167) | ||||||
| Feature_data | F48B9:Polysome | 1 | 40015 | |||
| F48B9:TranscriptionallyActiveRegion | 1 | 40015 | ||||
| F48B9:ChIPSeqTF | 1 | 40015 | ||||
| F48B9:TRF | 1 | 40015 | ||||
| F48B9:Dust | 1 | 40015 | ||||
| F48B9:inverted | 1 | 40015 | ||||
| Homol_data (16) | ||||||
| Structure | From | Source | CHROMOSOME_X | |||
| Overlap_right | T24C12 | 39816 | ||||
| Overlap_left | EGAP7 | |||||
| Clone_left_end | F48B9 | 1 | ||||
| T24C12 | 26877 | |||||
| Clone_right_end | F48B9 | 40015 | ||||
| DB_info | Database | EMBL | NDB_AC | FO081051 | ||
| NDB_ID | _U40955 | |||||
| NDB_SV | FO081051.2 | |||||
| Secondary_accession | U40955 | |||||
| DB_remark | The 5' clone is EGAP7, 200 bp overlap; the 3' clone is T24C12, 200 bp overlap. Actual start of this clone is at base position 1 of F48B9; actual end is at 40014 of F48B9. | |||||
| [121025] Sequence correction WBsf268278 : Insertion G1 bases from @ 19115 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Miller N | ||||
| Wilson RK | ||||||
| From_laboratory | RW | |||||
| Date | 17 Aug 1995 00:00:00 | |||||
| 10 Nov 1995 00:00:00 | ||||||
| Date_directory | 950816 | |||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | F48B9 | ||||
| Reference | WBPaper00015325 | |||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 368b42134566a680196ed49ea3ae55ce | ||||
| Status | Shotgun | |||||
| Finished | ||||||
| Submitted | 17 Aug 1995 00:00:00 | |||||
| Map | Sequence-X | |||||
| Interpolated_map_position | X | -16.9307 | ||||
| Method | Genomic_canonical |
