WormBase Tree Display for Sequence: T07A5
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| T07A5 | DNA | T07A5 | 28272 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00045475 | 15153 | 10323 | |
| WBGene00011554 | 10234 | 7405 | ||||
| WBGene00006785 | 22199 | 18560 | ||||
| WBGene00305587 | 1560 | 6954 | ||||
| WBGene00011558 | 22596 | 22489 | ||||
| WBGene00011557 | 3889 | 3152 | ||||
| WBGene00006802 | 22976 | 24056 | ||||
| WBGene00198925 | 1379 | 1245 | ||||
| WBGene00011556 | 4415 | 7460 | ||||
| CDS_child (239) | ||||||
| Transcript | T07A5.8 | 1379 | 1245 | |||
| T07A5.9 | 1560 | 6954 | ||||
| T07A5.1.1 | 10234 | 7405 | ||||
| T07A5.2.1 | 22199 | 18560 | ||||
| T07A5.3.1 | 4415 | 7460 | ||||
| T07A5.5.1 | 22596 | 22489 | ||||
| T07A5.6a.1 | 22976 | 24056 | ||||
| T07A5.6b.1 | 22976 | 24056 | ||||
| T07A5.6c.1 | 23123 | 24035 | ||||
| T07A5.7.1 | 15153 | 10323 | ||||
| Pseudogene | T07A5.4 | 3889 | 3152 | |||
| Nongenomic | yk362e9 | 788 | 1603 | |||
| PCR_product (42) | ||||||
| Allele (411) | ||||||
| Oligo_set | Aff_K10G9.1 | 739 | 2384 | |||
| Aff_T07A5.1 | 8838 | 7503 | ||||
| Aff_T07A5.2 | 20266 | 18926 | ||||
| Aff_T07A5.3 | 6392 | 7327 | ||||
| Feature_object (243) | ||||||
| Feature_data | T07A5:Polysome | 1 | 28272 | |||
| T07A5:TranscriptionallyActiveRegion | 1 | 28272 | ||||
| T07A5:ChIPSeqTF | 1 | 28272 | ||||
| T07A5:TRF | 1 | 28272 | ||||
| T07A5:Dust | 1 | 28272 | ||||
| T07A5:inverted | 1 | 28272 | ||||
| Homol_data (19) | ||||||
| Structure | From | Source | CHROMOSOME_III | |||
| Overlap_right | T07C4 | 28172 | ||||
| Overlap_left | K10G9 | |||||
| Clone_left_end | T07A5 | 1 | ||||
| T07C4 | 28172 | |||||
| Clone_right_end | K10G9 | 6501 | ||||
| DB_info | Database | EMBL | NDB_AC | Z48055 | ||
| NDB_SV | Z48055.1 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Buck D | ||||
| From_laboratory | HX | |||||
| Date_directory | 950130 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | T07A5 | ||||
| Reference | WBPaper00015076 | |||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 0a33b65c297daf771c244953eec5372b | ||||
| Status | Finished | 30 Jan 1995 00:00:00 | ||||
| Submitted | 02 Feb 1995 00:00:00 | |||||
| Annotated | 01 Feb 1995 00:00:00 | |||||
| Map | Sequence-III | Ends | Left | 5347 | ||
| Right | 5366 | |||||
| Interpolated_map_position | III | 2.30064 | ||||
| Assembly_tags | Clone left end | 1 | 4 | T07A5 | ||
| 28172 | 28175 | Start of overlap with T07C4 | ||||
| annotation | 1866 | 1866 | ?check this by re sequencing o05c7.s1 point mutation C > G on single read | |||
| 13372 | 13372 | point mutation C > T on single read | ||||
| 24343 | 24421 | ?This region has proved almost impossible to sequence through. For this reason the sequence at this point in particular and across this whole inverted repeat region are not to be regarded as 100% accurate | ||||
| 24351 | 24355 | This region has proved almost impossible to sequence through. For this reason the sequence at this point in particular and across this whole inverted repeat region are not to be regarded as 100% accurate | ||||
| Clone right end | 6497 | 6501 | K10G9 right end | |||
| 6503 | 6506 | K10G9 | ||||
| Method | Genomic_canonical |
