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WormBase Tree Display for Gene: WBGene00000668

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Name Class

WBGene00000668EvidencePerson_evidenceWBPerson345
WBPerson651
SMapS_parentSequenceW05B2
IdentityVersion1
NameCGC_namecol-93Person_evidenceWBPerson345
Sequence_nameW05B2.5
Molecular_nameW05B2.5
W05B2.5.1
CE20147
Other_nameCELE_W05B2.5Accession_evidenceNDBBX284603
Public_namecol-93
DB_infoDatabaseAceViewgene3M74
WormQTLgeneWBGene00000668
WormFluxgeneWBGene00000668
NDBlocus_tagCELE_W05B2.5
PanthergeneCAEEL|WormBase=WBGene00000668|UniProtKB=Q9U348
familyPTHR24637
NCBIgene259335
RefSeqproteinNM_001382993.2
TrEMBLUniProtAccQ9U348
UniProt_GCRPUniProtAccQ9U348
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:21WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcol
Allele (24)
RNASeq_FPKM (74)
GO_annotation00099946
00099947
00099948
00107663
OrthologWBGene00037709Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
WormBase-Compara
WBGene00037710Caenorhabditis briggsaeFrom_analysisOMA
WormBase-Compara
WBGene00078745Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00078736Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00027910Caenorhabditis briggsaeFrom_analysisOMA
WormBase-Compara
WBGene00078722Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00149136Caenorhabditis brenneriFrom_analysisOMA
WBGene00152855Caenorhabditis brenneriFrom_analysisOMA
WBGene00153568Caenorhabditis brenneriFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00137574Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00121213Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00180009Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00130580Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00271601Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00228353Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g198Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10369Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g11437Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g1406Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g1724Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g1725Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g8805Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13704Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g13705Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g7460Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17567Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g17818Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g3624Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g3626Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g20985Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16947Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g4895Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g12244Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g22190Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g22192Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g22194Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g4680Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g19486Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g20869Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g22600Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g24996Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g460Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g10633Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g13204Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g13205Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g13206Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00090.g4036Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_III.g9705Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_III.g9706Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_III.g9707Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_IV.g13532Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold335.g833Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00104.g4397Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_10786.g40142Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_010355Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_010356Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g5584Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30105900Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_30111400Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g8973Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00133689Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00237999Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00288383Trichuris murisFrom_analysisWormBase-Compara
Paralog (163)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSW05B2.5
Corresponding_transcriptW05B2.5.1
Other_sequence (23)
Associated_featureWBsf994220
WBsf227538
Experimental_infoRNAi_result (28)
Expr_patternExpr1030394
Expr1158354
Expr2010440
Expr2028680
Drives_constructWBCnstr00015936
WBCnstr00017255
WBCnstr00037383
WBCnstr00038500
Construct_productWBCnstr00037383
Microarray_results (12)
Expression_cluster (299)
Interaction (100)
Map_infoMapIIIPosition5.81063
PositivePositive_cloneW05B2Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00025192
WBPaper00038491
WBPaper00055090
WBPaper00057312
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
[200811 gw3] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (5.80129)
MethodGene