WormBase Tree Display for Gene: WBGene00001064
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| WBGene00001064 | SMap | S_parent | Sequence | T14B4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | dpy-2 | Person_evidence | WBPerson261 | |||||
| Sequence_name | T14B4.6 | ||||||||
| Molecular_name | T14B4.6 | ||||||||
| T14B4.6.1 | |||||||||
| CE04953 | |||||||||
| Other_name | rol-2 | ||||||||
| CELE_T14B4.6 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | dpy-2 | ||||||||
| DB_info | Database | AceView | gene | 2H5 | |||||
| WormQTL | gene | WBGene00001064 | |||||||
| WormFlux | gene | WBGene00001064 | |||||||
| NDB | locus_tag | CELE_T14B4.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001064|UniProtKB=P35799 | |||||||
| family | PTHR24637 | ||||||||
| NCBI | gene | 174107 | |||||||
| RefSeq | protein | NM_062966.9 | |||||||
| SwissProt | UniProtAcc | P35799 | |||||||
| UniProt_GCRP | UniProtAcc | P35799 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dpy | ||||||||
| Reference_allele | WBVar00142906 | ||||||||
| Allele (30) | |||||||||
| Legacy_information | e8 : dumpy left roller; early larvae non-dumpy. ES3 ME1. NA > 10 (e115 sc38ts sc78sd e489 (pka rol-2) etc.). | ||||||||
| See dpy-2. | |||||||||
| See also e115, e487, e489, e961, e1280, e1359 | |||||||||
| [C.elegansII] e8 : dumpy left roller; early larvae non-dumpy. Suppresses some alleles of glp-1, emb-5. ES3 ME1. OA>10: e115, sc38ts, sc78sd,e489 (pka rol-2), e961, q292 etc. Cloned: encodes collagen, 41% identical to adjacent gene dpy-10. [Brenner 1974; Levy et al. 1993; CH] | |||||||||
| Strain (15) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00044941 | ||||||||
| 00044942 | |||||||||
| 00044943 | |||||||||
| 00044944 | |||||||||
| 00044945 | |||||||||
| 00044946 | |||||||||
| 00044947 | |||||||||
| 00044948 | |||||||||
| 00108188 | |||||||||
| Ortholog (29) | |||||||||
| Paralog (162) | |||||||||
| Structured_description | Concise_description | The dpy-2 gene encodes an unusual cuticular collagen that is required for maintaining the normal body length of the animal in later larval stages; dpy-2 interacts with other cuticular collagens such as dpy-10 and sqt-1, and suppresses mutations in glp-1, mup-1, and emb-5. | Paper_evidence | WBPaper00001792 | |||||
| WBPaper00003853 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be a structural constituent of collagen and cuticulin-based cuticle. Involved in cuticle development involved in collagen and cuticulin-based cuticle molting cycle; post-embryonic body morphogenesis; and regulation of growth. Predicted to be part of collagen trimer. Expressed in head neurons and pharynx. Used to study skin disease. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Experimental_model | DOID:37 | Homo sapiens | Paper_evidence | WBPaper00061220 | ||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 02 May 2022 00:00:00 | ||||||||
| Models_disease_in_annotation | WBDOannot00001173 | ||||||||
| Molecular_info | Corresponding_CDS | T14B4.6 | |||||||
| Corresponding_transcript | T14B4.6.1 | ||||||||
| Other_sequence (15) | |||||||||
| Associated_feature | WBsf644316 | ||||||||
| WBsf657711 | |||||||||
| WBsf221491 | |||||||||
| WBsf221492 | |||||||||
| Experimental_info | RNAi_result (23) | ||||||||
| Expr_pattern | Expr4481 | ||||||||
| Expr4482 | |||||||||
| Expr1024298 | |||||||||
| Expr1030673 | |||||||||
| Expr1156898 | |||||||||
| Expr2011070 | |||||||||
| Expr2029307 | |||||||||
| Drives_construct | WBCnstr00012049 | ||||||||
| WBCnstr00012050 | |||||||||
| WBCnstr00037107 | |||||||||
| Construct_product | WBCnstr00037107 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (271) | |||||||||
| Interaction (192) | |||||||||
| WBProcess | WBbiopr:00000124 | ||||||||
| Map_info | Map | II | Position | 0.042787 | Error | 0.009724 | |||
| Well_ordered | |||||||||
| Positive | Inside_rearr | arDp2 | |||||||
| Positive_clone | T14B4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Mapping_data | 2_point | 36 | |||||||
| 47 | |||||||||
| 217 | |||||||||
| 6101 | |||||||||
| 7051 | |||||||||
| Multi_point (17) | |||||||||
| Pos_neg_data (22) | |||||||||
| Reference (73) | |||||||||
| Method | Gene |
