WormBase Tree Display for Gene: WBGene00001069
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| WBGene00001069 | SMap | S_parent | Sequence | F46C8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | dpy-7 | Person_evidence | WBPerson261 | |||||
| Sequence_name | F46C8.6 | ||||||||
| Molecular_name | F46C8.6 | ||||||||
| F46C8.6.1 | |||||||||
| CE04580 | |||||||||
| Other_name | CELE_F46C8.6 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | dpy-7 | ||||||||
| DB_info | Database | AceView | gene | XI156 | |||||
| WormQTL | gene | WBGene00001069 | |||||||
| WormFlux | gene | WBGene00001069 | |||||||
| NDB | locus_tag | CELE_F46C8.6 | |||||||
| NCBI | gene | 181013 | |||||||
| RefSeq | protein | NM_076873.7 | |||||||
| SwissProt | UniProtAcc | P34688 | |||||||
| UniProt_GCRP | UniProtAcc | P34688 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dpy | ||||||||
| Reference_allele | WBVar00142953 | ||||||||
| Allele (41) | |||||||||
| Possibly_affected_by | WBVar02154063 | ||||||||
| Legacy_information | e88 : dumpy (non-roller) ES3. ME1. NA8 (e1324ts sc27ts : left roller dumpy etc.). | ||||||||
| [C.elegansII] e88 : dumpy (non-roller). Suppresses some alleles of glp-1, emb-5.ES3. ME1. OA>8: e1324ts, sc27ts (left roller dumpy), m38, e2076, q288, etc. Cloned: transspliced to SL1; encodes typical cuticular collagen, 318aa, no close relatives; 4 missense alleles sequenced; expressed at each larval stage 5.5 hours pre-lethargus. [Johnstone et al. 1992; IA] | |||||||||
| Strain | WBStrain00023947 | ||||||||
| WBStrain00026736 | |||||||||
| WBStrain00026840 | |||||||||
| WBStrain00026854 | |||||||||
| WBStrain00003792 | |||||||||
| WBStrain00004301 | |||||||||
| WBStrain00004095 | |||||||||
| WBStrain00006165 | |||||||||
| WBStrain00006338 | |||||||||
| WBStrain00007960 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (20) | |||||||||
| Paralog (162) | |||||||||
| Structured_description | Concise_description | dpy-7 encodes a cuticular collagen; DPY-7 functions as a structural constituent of the extracellular cuticle whose activity is required for normal cuticular morphology and hence, proper body form. | Paper_evidence | WBPaper00001618 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 21 Sep 2005 00:00:00 | ||||||||
| Automated_description | A structural constituent of collagen and cuticulin-based cuticle. Involved in cuticle development involved in collagen and cuticulin-based cuticle molting cycle and post-embryonic body morphogenesis. Located in annular furrow extracellular matrix. Expressed in several structures, including P1; P12; P2; cuticle; and hypodermis. Used to study skin disease. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Experimental_model | DOID:37 | Homo sapiens | Paper_evidence | WBPaper00061220 | ||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 02 May 2022 00:00:00 | ||||||||
| Models_disease_asserted | WBDOannot00001175 | ||||||||
| Molecular_info (4) | |||||||||
| Experimental_info | RNAi_result (38) | ||||||||
| Expr_pattern (13) | |||||||||
| Drives_construct (124) | |||||||||
| Construct_product | WBCnstr00012412 | ||||||||
| WBCnstr00012449 | |||||||||
| WBCnstr00016584 | |||||||||
| WBCnstr00037102 | |||||||||
| Regulate_expr_cluster | WBPaper00053771:down_by_skn-1(RNAi)_at_dpy-7(e88) | ||||||||
| WBPaper00053771:up_at_dpy-7(e88) | |||||||||
| Antibody | WBAntibody00000615 | ||||||||
| WBAntibody00001857 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (292) | |||||||||
| Interaction (202) | |||||||||
| WBProcess | WBbiopr:00000124 | ||||||||
| Map_info | Map | X | Position | -1.6004 | Error | 0.006854 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | F46C8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| IJ#L3AT1 | |||||||||
| Mapping_data | 2_point (23) | ||||||||
| Multi_point (69) | |||||||||
| Pos_neg_data (23) | |||||||||
| Reference (152) | |||||||||
| Method | Gene |
