WormBase Tree Display for Gene: WBGene00001683
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| WBGene00001683 | SMap | S_parent | Sequence | T09F3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | gpd-1 | Person_evidence | WBPerson1051 | |||||
| Sequence_name | T09F3.3 | ||||||||
| Molecular_name | T09F3.3 | ||||||||
| T09F3.3.1 | |||||||||
| CE02343 | |||||||||
| Other_name | CELE_T09F3.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | gpd-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gpd | ||||||||
| Allele (23) | |||||||||
| Legacy_information | [C.elegansII] NMK. Encodes glyceraldehyde-3-phosphate-dehydrogenase, minor isozyme (GAPDHase-1), ubiquitous, predominant expression in embryo; sequence closest to gpd-4. [Barrios et al. 1989; HH] | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Contained_in_operon | CEOP2484 | ||||||||
| Ortholog (59) | |||||||||
| Paralog | WBGene00001686 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001685 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001684 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description (2) | |||||||||
| Disease_info | Potential_model | DOID:10652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4141) | ||||
| DOID:3319 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4141) | ||||||
| Molecular_info | Corresponding_CDS | T09F3.3 | |||||||
| Corresponding_transcript | T09F3.3.1 | ||||||||
| Other_sequence (202) | |||||||||
| Associated_feature | WBsf1013017 | ||||||||
| WBsf222004 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00018506 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052969 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008168 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008043 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00114592 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046227 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014257 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00115891 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr776 | ||||||||
| Expr4125 | |||||||||
| Expr1031003 | |||||||||
| Expr1156572 | |||||||||
| Expr2012205 | |||||||||
| Expr2030441 | |||||||||
| Drives_construct | WBCnstr00036773 | ||||||||
| Construct_product | WBCnstr00036773 | ||||||||
| Microarray_results | SMD_T09F3.3 | ||||||||
| A_12_P101710 | |||||||||
| GPL19516_CGZ0034430 | |||||||||
| GPL19516_CGZ0034431 | |||||||||
| GPL21109_T09F3.3.1 | |||||||||
| GPL3518_CE02343 | |||||||||
| GPL8304_CE_WBGene00001683_A | |||||||||
| GPL8304_CE_WBGene00001683_B | |||||||||
| Expression_cluster (198) | |||||||||
| Interaction (162) | |||||||||
| Map_info | Map | II | Position | 2.55928 | Error | 0.007034 | |||
| Positive | Positive_clone | HH#7B | |||||||
| T09F3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
| Pseudo_map_position | |||||||||
| Reference (25) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
