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WormBase Tree Display for Gene: WBGene00002497

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Name Class

WBGene00002497SMapS_parentSequenceF52H3
IdentityVersion1
NameCGC_namelet-268Person_evidenceWBPerson533
Sequence_nameF52H3.1
Molecular_nameF52H3.1
F52H3.1.1
CE03397
F52H3.1.2
F52H3.1.3
F52H3.1.4
Other_nameCELE_F52H3.1Accession_evidenceNDBBX284602
Public_namelet-268
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:28WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_info (12)
Disease_infoPotential_modelDOID:0080734Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:9081)
DOID:3910Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:9082)
DOID:684Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:9083)
Molecular_infoCorresponding_CDSF52H3.1
Corresponding_transcriptF52H3.1.1
F52H3.1.2
F52H3.1.3
F52H3.1.4
Other_sequence (37)
Associated_feature (14)
Experimental_infoRNAi_resultWBRNAi00062665Inferred_automaticallyRNAi_primary
WBRNAi00115624Inferred_automaticallyRNAi_primary
WBRNAi00071202Inferred_automaticallyRNAi_primary
WBRNAi00008830Inferred_automaticallyRNAi_primary
WBRNAi00071201Inferred_automaticallyRNAi_primary
WBRNAi00048028Inferred_automaticallyRNAi_primary
WBRNAi00025572Inferred_automaticallyRNAi_primary
WBRNAi00032642Inferred_automaticallyRNAi_primary
Expr_patternExpr1065
Expr1028803
Expr1031355
Expr1151846
Expr2013051
Expr2031283
Drives_constructWBCnstr00010059
WBCnstr00036328
Construct_productWBCnstr00010059
WBCnstr00036328
Microarray_results (21)
Expression_clusterWBPaper00030922:glycosylated_protein
WBPaper00031040:TGF-beta_adult_upregulated
WBPaper00033065:clk-1(qm30)_upregulated
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:bodywall-muscle_larva_enriched
WBPaper00037950:bodywall-muscle_larva_SelectivelyEnriched
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00041071:spe-44_upregulated
WBPaper00044260:1-methylnicotinamide_downregulated
WBPaper00044260:nicotic-acid_downregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045417:128Q-huntingtin_upreglated
WBPaper00045420:fertilization_upregulated_transcript
WBPaper00045521:Spermatogenic
WBPaper00045774:clk-1_downregulated
WBPaper00046121:mesoderm_unique
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_24-cell-embryo
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00051039:germline_enriched
WBPaper00051352:Long-Term-Association-Memory_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053388:dauer_regulated_Cluster5
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055482:pmt-2(RNAi)_downregulated
WBPaper00055648:spermatheca_expressed
WBPaper00055969:electromagnetic-field_downregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056161:male_enriched_siRNA
WBPaper00056167:ifo-1(kc2)_downregulated
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056826:hmc_biased
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057041:spc-1(cas971)_upregulated
WBPaper00057041:unc-70(cas983)_upregulated
WBPaper00057068:ints-4(RNAi)_downregulated_Cadmium
WBPaper00057140:pptr-1(tm3103)_upregulated
WBPaper00057154:HeatShock_upregulated_mRNA
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00059224:tph-1(mg280)_upregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059471:EGL-43_interacting
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059728:20ug_cholesterol_upregulated
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061203:let-418(n3536)_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061274:hypergravity_15xg_upregulated
WBPaper00061340:Body_wall_muscle
WBPaper00061340:BWM_anterior
WBPaper00061340:hmc
WBPaper00061340:hmc_and_homolog
WBPaper00061340:hmc_homolog
WBPaper00061340:Intestinal_and_rectal_muscle
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061508:P.mirabilis_24h_downregulated
WBPaper00061527:mlt-9_22518-F33D4.6_14044
WBPaper00061651:Distal_tip_cell_enriched
WBPaper00061651:Spermatheca_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064403:Heat-killed-E.Coli_upregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065373:Cisplatin_downregulated_WT
WBPaper00065392:Lb.rhamnosus_downregulated
WBPaper00065835:Day5_vs_Day1_downregulated
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065841:1_2
WBPaper00065841:7_1
WBPaper00065841:7_2
WBPaper00065841:7_4
WBPaper00065841:31_0
WBPaper00065841:43_0
WBPaper00065841:48_0
WBPaper00065841:51_1
WBPaper00065841:110_0
WBPaper00065841:110_1
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065975:P-body_vs_WholeAnimal_depleted
cgc4386_cluster_6_5
WBPaper00025032:cluster_50
WBPaper00025032:PAL-1_target_genes
WBPaper00026629:L4_hermaphrodite_enriched
WBPaper00030985:Photorhabdus_luminescens_upregulated
WBPaper00031003:0hr_muscle_enriched
WBPaper00031003:24hr_muscle_enriched
WBPaper00031003:total_muscle_enriched
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00032948:FedUp
WBPaper00035560:ahr-1_upregulated
WBPaper00036123:Atrazine_regulated
WBPaper00037695:LD_3-day
WBPaper00039866:ClassComp_daf-19_upregulated
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00040963:TA300_up
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045263:ProLongevity-mtROS_upregulated
WBPaper00047070:N2_starvation_downregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00053550:daf-19(m86)_upregulated_3-fold-embryo
[cgc5767]:cluster_12
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(186_min)
[cgc5767]:expression_class_SE
[cgc5767]:expression_class_SE_pi(186_min)
[cgc6390]:Cluster_B
Interaction (32)
Map_infoMapIIPosition1.8255Error0.002631
Well_ordered
PositiveInside_rearrmnDf71
mDf17
Positive_cloneF52H3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point5053
Pos_neg_data (16)
Reference (14)
RemarkSequence connection from [Inoue T]
MethodGene