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WormBase Tree Display for Gene: WBGene00004746

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Name Class

WBGene00004746SMapS_parentSequenceCHROMOSOME_X
IdentityVersion1
NameCGC_namesdc-2Person_evidenceWBPerson421
Sequence_nameC35C5.1
Molecular_nameC35C5.1
C35C5.1.1
CE18542
Other_nameCELE_C35C5.1Accession_evidenceNDBBX284606
Public_namesdc-2
DB_infoDatabaseAceViewgeneXM151
WormQTLgeneWBGene00004746
WormFluxgeneWBGene00004746
NDBlocus_tagCELE_C35C5.1
PanthergeneCAEEL|WormBase=WBGene00004746|UniProtKB=G5EBL3
familyPTHR13270
NCBIgene181341
RefSeqproteinNM_077523.7
SwissProtUniProtAccG5EBL3
TREEFAMTREEFAM_IDTF350609
UniProt_GCRPUniProtAccG5EBL3
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:36WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsdc
AlleleWBVar00275320Inferred_automaticallyFrom strain object: TY5684
WBVar00275298Inferred_automaticallyFrom strain object: TY714
WBVar00275314Inferred_automaticallyFrom strain object: TY824
WBVar00275317
WBVar00275316
WBVar00275292
WBVar00275315
WBVar00275304
WBVar02125022
WBVar01471208
WBVar01471209
WBVar01499887
WBVar01499888
WBVar01499710
WBVar01499714
WBVar01897935
WBVar01499715
WBVar01489248
WBVar01825275
WBVar00517599
WBVar00517600
WBVar00517601
WBVar00517602
WBVar00517603
WBVar00517604
WBVar00517605
WBVar00517606
WBVar00517607
WBVar00517608
WBVar00517609
WBVar00517610
WBVar00517611
WBVar00517612
WBVar00517613
WBVar00517614
WBVar00517615
WBVar01188523
WBVar00517616
WBVar01188524
WBVar01188525
WBVar01188526
WBVar01188527
WBVar01188528
WBVar01188529
WBVar01188530
WBVar01188531
WBVar01188532
WBVar01188533
WBVar01188534
WBVar01188535
WBVar01188536
WBVar01188537
WBVar01188538
WBVar01188539
WBVar01188540
WBVar01493176
WBVar01188541
WBVar01188542
WBVar01188543
WBVar01188544
WBVar01188545
WBVar01188546
WBVar01188547
WBVar01188548
WBVar01188549
WBVar01188550
WBVar01832026
WBVar01188551
WBVar01188552
WBVar01188553
WBVar01188554
WBVar01188555
WBVar00083209
WBVar01188556
WBVar00083210
WBVar01188557
WBVar01188558
WBVar01188559
WBVar01188560
WBVar01188561
WBVar01188562
WBVar01188563
WBVar01188564
WBVar01188565
WBVar01188566
WBVar01188567
WBVar00243489
WBVar01188568
WBVar01759475
WBVar01188569
WBVar01690529
WBVar01188570
WBVar01690530
WBVar01620604
WBVar01188571
WBVar01620605
WBVar01690531
WBVar01188572
WBVar01188573
WBVar01188574
WBVar01188575
WBVar01188576
WBVar01188577
WBVar01188578
WBVar01188579
WBVar01188580
WBVar01188581
WBVar01188582
WBVar01188583
WBVar01188584
WBVar01188585
WBVar01188586
WBVar01188587
WBVar01188588
WBVar01188589
WBVar01188590
WBVar01188591
WBVar01981344
WBVar01188592
WBVar01188593
WBVar01188594
WBVar01188595
WBVar02140128
WBVar01188596
WBVar01188597
WBVar02140129
WBVar01188598
WBVar01188599
WBVar01188600
WBVar01188601
WBVar01188602
WBVar01498960
WBVar01471207
WBVar01500067
Legacy_informationSee also y15
[C.elegansII] y15 : XX animals inviable and masculinized, XO animals WT. No maternal rescue. ES3 (XX); ME3.OA>20: y46, y74, y55 (weaker, Egl or Tra phenotypes). ???Cloned: 9.2 kb transcript, encodes predicted 2962 protein (344 kD), highly charged. [Nusbaum and Meyer 1989; TY]
StrainWBStrain00035098
WBStrain00035100
WBStrain00035166
WBStrain00035105
RNASeq_FPKM (74)
GO_annotation00009802
00009803
00009804
00009805
00009806
00009807
00009808
Ortholog (33)
ParalogWBGene00018316Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionThe sdc-2 gene encodes a protein that represses transcription of X chromosomes to achieve dosage compensation, and that also represses the male sex-determination gene her-1 to elicit hermaphrodite differentiation.Paper_evidenceWBPaper00005215
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionInvolved in dosage compensation by hypoactivation of X chromosome and negative regulation of transcription by RNA polymerase II. Located in nuclear chromosome.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC35C5.1
Corresponding_transcriptC35C5.1.1
Other_sequenceAF111934
Associated_feature (9)
Gene_product_bindsWBsf019092
WBsf019093
Transcription_factorWBTranscriptionFactor000093
WBTranscriptionFactor000689
Experimental_infoRNAi_result (35)
Expr_patternExpr10429
Expr11875
Expr1028636
Expr1032344
Expr1145975
Expr2015659
Expr2033892
Drives_constructWBCnstr00006791
WBCnstr00015322
WBCnstr00035415
Construct_productWBCnstr00005103
WBCnstr00005104
WBCnstr00006790
WBCnstr00006791
WBCnstr00035415
AntibodyWBAntibody00000228
WBAntibody00000496
WBAntibody00000497
WBAntibody00001184
WBAntibody00002039
WBAntibody00002042
WBAntibody00002043
Microarray_results (21)
Expression_cluster (134)
Interaction (77)
WBProcessWBbiopr:00000056
Map_infoMapXPosition4.34757Error0.06798
Well_ordered
PositiveInside_rearryDp7
Positive_cloneC03B2
C35C5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point1438
1439
1440
1774
2062
2293
3319
3642
3643
3687
Pos_neg_data (11)
Landmark_gene
Reference (135)
MethodGene