WormBase Tree Display for Gene: WBGene00005153
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WBGene00005153 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | srf-3 | Person_evidence | WBPerson494 | |||
Sequence_name | M02B1.1 | ||||||
Molecular_name | M02B1.1a | ||||||
M02B1.1a.1 | |||||||
CE43555 | |||||||
M02B1.1b | |||||||
CE37656 | |||||||
M02B1.1c | |||||||
CE45668 | |||||||
M02B1.1b.1 | |||||||
M02B1.1c.1 | |||||||
Other_name | CELE_M02B1.1 | Accession_evidence | NDB | BX284604 | |||
Public_name | srf-3 | ||||||
DB_info | Database (12) | ||||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info (12) | |||||||
Disease_info | Experimental_model | DOID:104 | Homo sapiens | Paper_evidence | WBPaper00006215 | ||
Curator_confirmed | WBPerson324 | ||||||
Date_last_updated | 07 Nov 2023 00:00:00 | ||||||
Potential_model | DOID:0070265 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11022) | |||
Disease_relevance | C. elegans is used as a model system to study bacterial adherence via biofilm formation and to identify genes in the infectious agent as well as the host that are required for infection; elegans srf genes are required for cuticle surface properties like binding to antigens, and for the adherence of bacterial pathogens like Yersinia pseduotuberculosis and Yersinia pestis via biofilms. | Homo sapiens | Paper_evidence | WBPaper00001706 | |||
WBPaper00026735 | |||||||
WBPaper00029153 | |||||||
Curator_confirmed | WBPerson324 | ||||||
Date_last_updated | 06 Mar 2013 00:00:00 | ||||||
Models_disease_in_annotation | WBDOannot00000015 | ||||||
Molecular_info | Corresponding_CDS | M02B1.1a | |||||
M02B1.1b | |||||||
M02B1.1c | |||||||
Corresponding_CDS_history | M02B1.1:wp109 | ||||||
M02B1.1:wp133 | |||||||
M02B1.1:wp201 | |||||||
Corresponding_transcript | M02B1.1a.1 | ||||||
M02B1.1b.1 | |||||||
M02B1.1c.1 | |||||||
Other_sequence | CRC11400_1 | ||||||
FC815126.1 | |||||||
PPC11536_1 | |||||||
JI467852.1 | |||||||
CR05429 | |||||||
SRC00576_1 | |||||||
JO472062.1 | |||||||
SR01573 | |||||||
Name_isotig07744 | |||||||
JI171965.1 | |||||||
Associated_feature | WBsf646492 | ||||||
WBsf659850 | |||||||
WBsf998259 | |||||||
WBsf1018447 | |||||||
WBsf229337 | |||||||
Experimental_info | RNAi_result | WBRNAi00050803 | Inferred_automatically | RNAi_primary | |||
WBRNAi00062589 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr3026 | ||||||
Expr1013846 | |||||||
Expr1032513 | |||||||
Expr1154495 | |||||||
Expr2016312 | |||||||
Expr2034539 | |||||||
Drives_construct | WBCnstr00011081 | ||||||
Construct_product | WBCnstr00011081 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (86) | |||||||
Interaction | WBInteraction000008513 | ||||||
WBInteraction000008514 | |||||||
WBInteraction000008515 | |||||||
WBInteraction000008516 | |||||||
WBInteraction000052148 | |||||||
WBInteraction000052751 | |||||||
WBInteraction000326994 | |||||||
WBInteraction000425692 | |||||||
WBProcess | WBbiopr:00000008 | ||||||
WBbiopr:00000039 | |||||||
Map_info | Map | IV | Position | 6.37339 | Error | 0.00679 | |
Positive | Positive_clone | M02B1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | 2_point | 4986 | |||||
4987 | |||||||
Multi_point | 1750 | ||||||
1751 | |||||||
2656 | |||||||
4484 | |||||||
Pos_neg_data | 4985 | ||||||
7207 | |||||||
Reference (50) | |||||||
Method | Gene |