WormBase Tree Display for Gene: WBGene00006782

WBGene00006782 SMap: S_parent: Sequence: C04F5
  Identity: Version: 2
    Name: CGC_name: unc-46 Paper_evidence: WBPaper00000031
      Sequence_name: C04F5.3
      Molecular_name: C04F5.3
        C04F5.3.1
        CE27791
      Other_name: CELE_C04F5.3 Accession_evidence: NDB BX284605
      Public_name: unc-46
    DB_info: Database: AceView gene 5F576
        WormQTL gene WBGene00006782
        WormFlux gene WBGene00006782
        NDB locus_tag CELE_C04F5.3
        NCBI gene 178897
        RefSeq protein NM_071964.5
        TREEFAM TREEFAM_ID TF320931
        TrEMBL UniProtAcc Q9GZD5
        UniProt_GCRP UniProtAcc Q9GZD5
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:42 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 23 Mar 2005 14:05:09 WBPerson2970 Event: Acquires_merge: WBGene00015445
      Acquires_merge: WBGene00015445
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    Reference_allele: WBVar00143011
    Allele (38)
    Legacy_information: e177 : shrinker contracts both dorsally and ventrally when prodded slow good forward movement poor backing; slightly small. ES3 ME2. NA3 (e300 e642).
      [C.elegansII] e177 : shrinker contracts both dorsally and ventrally when prodded, slow, good forward movement, poor backing; slightly small. ES3 ME2. OA2: e300, e642. [Brenner 1974; McIntire et al. 1993; MT]
    Strain: WBStrain00023971
      WBStrain00023972
      WBStrain00023976
      WBStrain00023978
      WBStrain00023979
      WBStrain00023980
      WBStrain00023981
      WBStrain00023982
      WBStrain00024119
      WBStrain00027611
      WBStrain00030594
      WBStrain00040664
      WBStrain00000511
      WBStrain00000512
      WBStrain00000513
      WBStrain00000515
      WBStrain00000517
      WBStrain00000518
      WBStrain00000519
      WBStrain00000520
      WBStrain00000521
      WBStrain00000522
      WBStrain00000523
      WBStrain00000524
      WBStrain00000525
      WBStrain00000526
      WBStrain00000528
      WBStrain00000530
      WBStrain00000531
      WBStrain00000535
      WBStrain00000536
      WBStrain00000537
      WBStrain00000538
      WBStrain00000539
      WBStrain00000540
      WBStrain00000543
      WBStrain00000544
      WBStrain00000545
      WBStrain00000546
      WBStrain00000547
      WBStrain00000548
      WBStrain00000586
      WBStrain00000587
      WBStrain00000588
      WBStrain00000589
      WBStrain00000590
      WBStrain00000591
      WBStrain00000592
      WBStrain00000593
      WBStrain00000594
      WBStrain00000595
      WBStrain00000596
      WBStrain00000597
      WBStrain00000611
      WBStrain00000484
      WBStrain00000612
      WBStrain00000613
      WBStrain00000614
      WBStrain00000615
      WBStrain00000616
      WBStrain00000617
      WBStrain00000618
      WBStrain00000619
      WBStrain00000620
      WBStrain00000621
      WBStrain00000622
      WBStrain00000623
      WBStrain00000624
      WBStrain00000625
      WBStrain00000635
      WBStrain00000636
      WBStrain00000642
      WBStrain00000643
      WBStrain00000644
      WBStrain00000645
      WBStrain00000646
      WBStrain00000647
      WBStrain00000648
      WBStrain00000649
      WBStrain00000650
      WBStrain00000651
      WBStrain00000652
      WBStrain00000653
      WBStrain00000654
      WBStrain00000658
      WBStrain00000659
      WBStrain00000676
      WBStrain00000677
      WBStrain00000678
      WBStrain00000679
      WBStrain00000680
      WBStrain00000681
      WBStrain00000682
      WBStrain00000683
      WBStrain00000684
      WBStrain00000685
      WBStrain00000687
      WBStrain00000688
      WBStrain00000689
      WBStrain00000690
      WBStrain00000691
      WBStrain00000692
      WBStrain00000693
      WBStrain00000694
      WBStrain00000695
      WBStrain00000696
      WBStrain00000697
      WBStrain00000698
      WBStrain00000699
      WBStrain00000700
      WBStrain00000701
      WBStrain00000702
      WBStrain00000703
      WBStrain00000704
      WBStrain00000705
      WBStrain00000706
      WBStrain00000707
      WBStrain00000709
      WBStrain00000710
      WBStrain00000711
      WBStrain00000713
      WBStrain00000714
      WBStrain00000715
      WBStrain00000716
      WBStrain00000717
      WBStrain00000719
      WBStrain00000720
      WBStrain00000721
      WBStrain00000722
      WBStrain00000723
      WBStrain00000724
      WBStrain00000725
      WBStrain00000726
      WBStrain00000727
      WBStrain00000728
      WBStrain00000729
      WBStrain00000730
      WBStrain00000731
      WBStrain00000732
      WBStrain00000734
      WBStrain00000735
      WBStrain00000736
      WBStrain00000737
      WBStrain00000738
      WBStrain00000739
      WBStrain00000742
      WBStrain00000743
      WBStrain00000744
      WBStrain00000745
      WBStrain00000746
      WBStrain00000747
      WBStrain00000751
      WBStrain00000818
      WBStrain00003995
      WBStrain00004117
      WBStrain00004952
      WBStrain00004954
      WBStrain00004990
      WBStrain00004999
      WBStrain00005653
      WBStrain00005654
      WBStrain00008003
      WBStrain00008004
    RNASeq_FPKM (74)
    GO_annotation: 00093030
      00093031
    Ortholog (29)
    Structured_description: Concise_description: unc-46 encodes a type I transmembrane protein that contains a single motif similar to the LAMP (lysosomal associated membrane glycoprotein) domain; UNC-46 and UNC-47, the C. elegans vesicular GABA transporter, are required in GABAergic neurons for loading GABA into synaptic vesicles and thus, for all GABA-mediated behaviors; a rescuing UNC-46::GFP fusion protein localizes to synaptic varicosities in the dorsal and ventral nerve cords; UNC-46 and UNC-47 are mutually required for sorting/localization to synaptic vesicles; when overexpressed, unc-47 can rescue unc-46 mutant animals. Paper_evidence: WBPaper00030788
          Curator_confirmed: WBPerson1843
          Date_last_updated: 12 Jun 2008 00:00:00
      Automated_description: Located in cytoplasmic vesicle and neuromuscular junction. Expressed in GLR and neurons. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C04F5.3
    Corresponding_transcript: C04F5.3.1
    Other_sequence: Acan_isotig12346
    Associated_feature: WBsf652609
      WBsf999935
      WBsf233650
  Experimental_info: RNAi_result: WBRNAi00090126 Inferred_automatically: RNAi_primary
      WBRNAi00039641 Inferred_automatically: RNAi_primary
      WBRNAi00028449 Inferred_automatically: RNAi_primary
      WBRNAi00089966 Inferred_automatically: RNAi_primary
      WBRNAi00010134 Inferred_automatically: RNAi_primary
      WBRNAi00089726 Inferred_automatically: RNAi_primary
      WBRNAi00090284 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr4785
      Expr4786
      Expr13159
      Expr15441
      Expr1021811
      Expr1143737
      Expr2017879
      Expr2036015
    Drives_construct: WBCnstr00001640
      WBCnstr00008362
      WBCnstr00008363
      WBCnstr00012243
      WBCnstr00020699
      WBCnstr00034155
    Construct_product: WBCnstr00001640
      WBCnstr00034155
      WBCnstr00038183
    Microarray_results (20)
    Expression_cluster (116)
    Interaction: WBInteraction000502940
      WBInteraction000502941
      WBInteraction000502942
      WBInteraction000518962
    WBProcess: WBbiopr:00000010
  Map_info: Map: V Position: -2.52065 Error: 0.028521
    Well_ordered
    Positive: Inside_rearr: nDf32
        yDp1
        nDf33
        sDf26
        rT1
      Positive_clone: C04F5 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: 2_point (27)
      Multi_point (41)
      Pos_neg_data: 845
        2134
        3076
        3259
  Reference (65)
  Method: Gene