WormBase Tree Display for Gene: WBGene00006782
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WBGene00006782 | SMap | S_parent | Sequence | C04F5 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | unc | |||||
Reference_allele | WBVar00143011 | |||||
Allele (38) | ||||||
Legacy_information | e177 : shrinker contracts both dorsally and ventrally when prodded slow good forward movement poor backing; slightly small. ES3 ME2. NA3 (e300 e642). | |||||
[C.elegansII] e177 : shrinker contracts both dorsally and ventrally when prodded, slow, good forward movement, poor backing; slightly small. ES3 ME2. OA2: e300, e642. [Brenner 1974; McIntire et al. 1993; MT] | ||||||
Strain (163) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00093030 | |||||
00093031 | ||||||
Ortholog (29) | ||||||
Structured_description | Concise_description | unc-46 encodes a type I transmembrane protein that contains a single motif similar to the LAMP (lysosomal associated membrane glycoprotein) domain; UNC-46 and UNC-47, the C. elegans vesicular GABA transporter, are required in GABAergic neurons for loading GABA into synaptic vesicles and thus, for all GABA-mediated behaviors; a rescuing UNC-46::GFP fusion protein localizes to synaptic varicosities in the dorsal and ventral nerve cords; UNC-46 and UNC-47 are mutually required for sorting/localization to synaptic vesicles; when overexpressed, unc-47 can rescue unc-46 mutant animals. | Paper_evidence | WBPaper00030788 | ||
Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 12 Jun 2008 00:00:00 | |||||
Automated_description | Located in cytoplasmic vesicle and neuromuscular junction. Expressed in GLR and neurons. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | C04F5.3 | ||||
Corresponding_transcript | C04F5.3.1 | |||||
Other_sequence | Acan_isotig12346 | |||||
Associated_feature | WBsf652609 | |||||
WBsf999935 | ||||||
WBsf233650 | ||||||
Experimental_info | RNAi_result | WBRNAi00090126 | Inferred_automatically | RNAi_primary | ||
WBRNAi00039641 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00028449 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00089966 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00010134 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00089726 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00090284 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr4785 | |||||
Expr4786 | ||||||
Expr13159 | ||||||
Expr15441 | ||||||
Expr1021811 | ||||||
Expr1143737 | ||||||
Expr2017879 | ||||||
Expr2036015 | ||||||
Drives_construct | WBCnstr00001640 | |||||
WBCnstr00008362 | ||||||
WBCnstr00008363 | ||||||
WBCnstr00012243 | ||||||
WBCnstr00020699 | ||||||
WBCnstr00034155 | ||||||
Construct_product | WBCnstr00001640 | |||||
WBCnstr00034155 | ||||||
WBCnstr00038183 | ||||||
Microarray_results (20) | ||||||
Expression_cluster (116) | ||||||
Interaction | WBInteraction000502940 | |||||
WBInteraction000502941 | ||||||
WBInteraction000502942 | ||||||
WBInteraction000518962 | ||||||
WBProcess | WBbiopr:00000010 | |||||
Map_info (4) | ||||||
Reference (65) | ||||||
Method | Gene |