WormBase Tree Display for Gene: WBGene00008081
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| WBGene00008081 | SMap | S_parent | Sequence | C44B9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | athp-1 | Person_evidence | WBPerson1997 | |||||
| Sequence_name | C44B9.4 | ||||||||
| Molecular_name | C44B9.4 | ||||||||
| C44B9.4.1 | |||||||||
| CE30897 | |||||||||
| C44B9.4.2 | |||||||||
| Other_name | CELE_C44B9.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | athp-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 18 Jul 2005 13:34:00 | WBPerson2970 | Name_change | CGC_name | athp-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | athp | ||||||||
| Allele (215) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00061808 | ||||||||
| 00061809 | |||||||||
| 00061810 | |||||||||
| 00061811 | |||||||||
| 00061812 | |||||||||
| 00061813 | |||||||||
| 00061814 | |||||||||
| 00061815 | |||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00001972 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00001973 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001974 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00012209 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00022182 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable transcription corepressor activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of Sin3-type complex. Is an ortholog of human PHF12 (PHD finger protein 12). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C44B9.4 | |||||||
| Corresponding_CDS_history | C44B9.4:wp80 | ||||||||
| Corresponding_transcript | C44B9.4.1 | ||||||||
| C44B9.4.2 | |||||||||
| Other_sequence | CRC06532_1 | ||||||||
| MH09859 | |||||||||
| EX538937.1 | |||||||||
| CR00757 | |||||||||
| PT04534 | |||||||||
| Associated_feature | WBsf645590 | ||||||||
| WBsf659548 | |||||||||
| WBsf978786 | |||||||||
| WBsf994180 | |||||||||
| WBsf994181 | |||||||||
| WBsf994182 | |||||||||
| WBsf225771 | |||||||||
| WBsf225772 | |||||||||
| Transcription_factor | WBTranscriptionFactor000625 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00113483 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029792 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00082925 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006161 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011920 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00107676 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00115793 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042438 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018829 | ||||||||
| Expr1033509 | |||||||||
| Expr1146427 | |||||||||
| Expr2009501 | |||||||||
| Expr2027738 | |||||||||
| Drives_construct | WBCnstr00033249 | ||||||||
| Construct_product | WBCnstr00033249 | ||||||||
| WBCnstr00038822 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (140) | |||||||||
| Interaction (132) | |||||||||
| Map_info | Map | III | Position | 5.53598 | Error | 0.005774 | |||
| Positive | Positive_clone | C44B9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| WBPaper00035598 | |||||||||
| WBPaper00060662 | |||||||||
| WBPaper00061738 | |||||||||
| WBPaper00065165 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
