Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00014046

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00014046SMapS_parentSequenceZK666
IdentityVersion2
NameCGC_nameclec-60Person_evidenceWBPerson261
WBPerson655
Sequence_nameZK666.6
Molecular_nameZK666.6
ZK666.6.1
CE02391
Other_nameCELE_ZK666.6Accession_evidenceNDBBX284602
Public_nameclec-60
DB_infoDatabaseAceViewgene2K770
WormQTLgeneWBGene00014046
WormFluxgeneWBGene00014046
NDBlocus_tagCELE_ZK666.6
PanthergeneCAEEL|WormBase=WBGene00014046|UniProtKB=Q23564
familyPTHR31024
NCBIgene191384
RefSeqproteinNM_063858.4
TREEFAMTREEFAM_IDTF317104
TrEMBLUniProtAccQ23564
UniProt_GCRPUniProtAccQ23564
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:55WBPerson1971EventImportedInitial conversion from CDS class of WS125
228 Sep 2005 17:40:12WBPerson2970Name_changeCGC_nameclec-60
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
Allele (24)
StrainWBStrain00004708
RNASeq_FPKM (74)
GO_annotation00078945
Ortholog (60)
Paralog (13)
Structured_descriptionConcise_descriptionclec-60 encodes a C-type lectin protein with no obvious non-nematode orthologs; clec-60 appears to play a role in the innate immune respone to some bacterial pathogens, including Microbacterium nematophilum and Salmonella enterica; clec-60 transcription is induced 6.6-fold by infection with M. nematophilum, making it one of the most strongly infection-responsive genes (second only to tts-1); CLEC-60 is expressed throughout the larval intestine, with expression continuing in the adult adult primarily in the posterior intestinal cells int8 and int9; CLEC-60 contains an N-terminal von Willebrand factor type A domain and a C-terminal C-type lectin domain.Paper_evidenceWBPaper00027722
WBPaper00044718
Person_evidenceWBPerson426
Curator_confirmedWBPerson1843
WBPerson567
Date_last_updated19 Feb 2014 00:00:00
Automated_descriptionInvolved in defense response to Gram-positive bacterium. Expressed in intestine.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSZK666.6
Corresponding_transcriptZK666.6.1
Other_sequenceFD516125.1
CBC05269_1
CSC01347_1
CSC01143_1
FD516159.1
Associated_featureWBsf989355
WBsf223790
Experimental_infoRNAi_resultWBRNAi00078250Inferred_automaticallyRNAi_primary
WBRNAi00110396Inferred_automaticallyRNAi_primary
WBRNAi00076894Inferred_automaticallyRNAi_primary
WBRNAi00110394Inferred_automaticallyRNAi_primary
WBRNAi00022114Inferred_automaticallyRNAi_primary
WBRNAi00106798Inferred_automaticallyRNAi_primary
WBRNAi00038403Inferred_automaticallyRNAi_primary
WBRNAi00110395Inferred_automaticallyRNAi_primary
WBRNAi00082508Inferred_automaticallyRNAi_primary
WBRNAi00059632Inferred_automaticallyRNAi_primary
Expr_patternExpr3949
Expr12635
Expr1025412
Expr1163042
Expr2010193
Drives_constructWBCnstr00011773
WBCnstr00015098
WBCnstr00022342
WBCnstr00029353
Construct_productWBCnstr00029353
Microarray_results (18)
Expression_cluster (316)
Interaction (81)
WBProcessWBbiopr:00000008
WBbiopr:00000039
Map_infoMapIIPosition2.80209Error0.031689
PositivePositive_cloneZK666Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (33)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene