WormBase Tree Display for Gene: WBGene00016670
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| WBGene00016670 | SMap | S_parent | Sequence | C45G7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ilys-3 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | C45G7.3 | ||||||||
| Molecular_name | C45G7.3 | ||||||||
| C45G7.3.1 | |||||||||
| CE24850 | |||||||||
| Other_name | CELE_C45G7.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ilys-3 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 May 2007 16:58:23 | WBPerson2970 | Name_change | CGC_name | ilys-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ilys | ||||||||
| Allele (30) | |||||||||
| Strain | WBStrain00037363 | ||||||||
| WBStrain00004732 | |||||||||
| WBStrain00004740 | |||||||||
| WBStrain00004741 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (26) | |||||||||
| Ortholog (26) | |||||||||
| Paralog | WBGene00016668 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00016669 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017691 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016958 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020982 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enables lysozyme activity. Involved in antibacterial innate immune response and defense response to Gram-positive bacterium. Located in late endosome lumen; lysosomal lumen; and recycling endosome lumen. Expressed in coelomocyte; hypodermis; intestinal cell; and terminal bulb. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C45G7.3 | |||||||
| Corresponding_transcript | C45G7.3.1 | ||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf228023 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00092215 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011984 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00070080 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000480 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029837 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042538 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092218 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00078253 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9963 | ||||||||
| Expr13079 | |||||||||
| Expr13080 | |||||||||
| Expr1014535 | |||||||||
| Expr1146525 | |||||||||
| Expr2030958 | |||||||||
| Drives_construct | WBCnstr00014976 | ||||||||
| WBCnstr00015097 | |||||||||
| WBCnstr00027901 | |||||||||
| WBCnstr00038029 | |||||||||
| WBCnstr00038573 | |||||||||
| Construct_product | WBCnstr00027901 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (284) | |||||||||
| Interaction (23) | |||||||||
| WBProcess | WBbiopr:00000008 | ||||||||
| Map_info | Map | IV | Position | -7.42586 | Error | 0.019843 | |||
| Positive | Positive_clone | C45G7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (15) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
