WormBase Tree Display for Gene: WBGene00021868

WBGene00021868 SMap: S_parent: Sequence: Y54G2A
  Identity: Version: 2
    Name: CGC_name: atln-1 Paper_evidence: WBPaper00042415
      Sequence_name: Y54G2A.2
      Molecular_name (12)
      Other_name: 4D561 Accession_evidence: EMBL AF303255
        CELE_Y54G2A.2 Accession_evidence: NDB BX284604
      Public_name: atln-1
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 04 Jun 2013 14:47:04 WBPerson2970 Name_change: CGC_name: atln-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: atln
    Allele: WBVar01630116
      WBVar01630117
      WBVar01803681
      WBVar01481490
      WBVar01481491
      WBVar01481492
      WBVar01481493
      WBVar01481494
      WBVar00299972
      WBVar02103510
      WBVar02103511
      WBVar01580482
      WBVar02076611
      WBVar02118985
      WBVar01726522
      WBVar01726523
      WBVar01726524
      WBVar01726525
      WBVar01726526
      WBVar01726527
      WBVar01726528
      WBVar01726529
      WBVar01726530
      WBVar01726531
      WBVar01726532
      WBVar01726533
      WBVar01726534
      WBVar01726535
      WBVar01726536
      WBVar01726537
      WBVar01726538
      WBVar01726539
      WBVar01726540
      WBVar02123242
      WBVar02041928
      WBVar01965495
      WBVar02110186
      WBVar02110187
      WBVar01687901
      WBVar00298585
      WBVar00570523
      WBVar00570526
      WBVar00570528
      WBVar01953630
      WBVar00570529
      WBVar01953631
      WBVar01953632
      WBVar01498316
      WBVar02031103
      WBVar00894785
      WBVar01568574
      WBVar00894786
      WBVar00894787
      WBVar01568575
      WBVar01513672
      WBVar01568576
      WBVar00894788
      WBVar00894789
      WBVar01568577
      WBVar01568578
      WBVar00894790
      WBVar00894791
      WBVar01568579
      WBVar00894792
      WBVar01568580
      WBVar01568581
      WBVar02020176
      WBVar02153758
      WBVar00894793
      WBVar01568582
      WBVar00894794
      WBVar02020177
      WBVar00894795
      WBVar01499633
      WBVar02020178
      WBVar01568583
      WBVar02020179
      WBVar00894796
      WBVar00894797
      WBVar02020180
      WBVar00894798
      WBVar00308077
      WBVar02020181
      WBVar00894799
      WBVar00894800
      WBVar00894801
      WBVar00894802
      WBVar00894803
      WBVar00894804
      WBVar00894805
      WBVar00894806
      WBVar00186406
      WBVar00894807
      WBVar00186407
      WBVar00186408
      WBVar00894808
      WBVar00186409
      WBVar00894809
      WBVar00186410
      WBVar00894810
      WBVar00186411
      WBVar00894811
      WBVar00894812
      WBVar00186412
      WBVar00894813
      WBVar00186413
      WBVar00186414
      WBVar00894814
      WBVar00894815
      WBVar00186415
      WBVar00894816
      WBVar00186416
      WBVar00186417
      WBVar00894817
      WBVar00186418
      WBVar00894818
      WBVar00894819
      WBVar00186419
      WBVar00894820
      WBVar02036819
      WBVar00894821
      WBVar02122583
      WBVar00894822
      WBVar01499661
      WBVar00894823
      WBVar00894824
      WBVar00894825
      WBVar00894826
      WBVar00894827
      WBVar00894828
      WBVar02119462
      WBVar02119463
      WBVar02119464
      WBVar01922233
      WBVar01922234
      WBVar01922235
      WBVar00092407
      WBVar01922236
      WBVar01497836
      WBVar01922237
      WBVar02133498
      WBVar00419994
      WBVar00419995
      WBVar00419996
      WBVar00419997
      WBVar00419998
      WBVar00419999
      WBVar00420000
      WBVar00420001
      WBVar00420002
      WBVar00420003
      WBVar00420004
      WBVar00420005
      WBVar01900865
    Strain: WBStrain00031831
      WBStrain00047686
    RNASeq_FPKM (74)
    GO_annotation: 00081747
      00081748
      00081749
      00081750
      00081751
      00105774
      00126073
      00126074
    Ortholog (34)
    Paralog: WBGene00012763 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable GTP binding activity and GTPase activity. Involved in IRE1-mediated unfolded protein response. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in hereditary sensory neuropathy type 1D; hereditary sensory neuropathy type 1F; and hereditary spastic paraplegia 3A. Is an ortholog of human ATL3 (atlastin GTPase 3). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0110791 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11231)
      DOID:0070154 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:24526)
      DOID:0070156 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11231)
  Molecular_info: Corresponding_CDS: Y54G2A.2a
      Y54G2A.2b
      Y54G2A.2c
      Y54G2A.2d
    Corresponding_CDS_history: Y54G2A.2:wp129
    Corresponding_transcript: Y54G2A.2a.1
      Y54G2A.2b.1
      Y54G2A.2c.1
      Y54G2A.2d.1
    Other_sequence (71)
    Associated_feature: WBsf660004
      WBsf660005
      WBsf995777
      WBsf228049
      WBsf228050
      WBsf228051
      WBsf228052
  Experimental_info: RNAi_result: WBRNAi00112388 Inferred_automatically: RNAi_primary
      WBRNAi00112387 Inferred_automatically: RNAi_primary
      WBRNAi00057450 Inferred_automatically: RNAi_primary
      WBRNAi00085582 Inferred_automatically: RNAi_primary
      WBRNAi00112386 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr14263
      Expr1026901
      Expr1039602
      Expr1160883
      Expr2009506
      Expr2027743
    Construct_product: WBCnstr00017652
      WBCnstr00040692
    Antibody: WBAntibody00002439
    Microarray_results (29)
    Expression_cluster (93)
    Interaction (14)
  Map_info: Map: IV Position: -6.73979
    Positive: Positive_clone: Y54G2A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00042415
    WBPaper00043241
    WBPaper00055090
    WBPaper00056132
    WBPaper00060244
    WBPaper00064947
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene