WormBase Tree Display for Gene: WBGene00022060
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| WBGene00022060 | SMap | S_parent | Sequence | Y67D8A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | dmd-9 | Person_evidence | WBPerson1375 | |||||
| Sequence_name | Y67D8A.3 | ||||||||
| Molecular_name | Y67D8A.3 | ||||||||
| Y67D8A.3.1 | |||||||||
| CE22786 | |||||||||
| Other_name | CELE_Y67D8A.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | dmd-9 | ||||||||
| DB_info | Database | AceView | gene | 4E16 | |||||
| WormQTL | gene | WBGene00022060 | |||||||
| WormFlux | gene | WBGene00022060 | |||||||
| NDB | locus_tag | CELE_Y67D8A.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022060|UniProtKB=Q95XU1 | |||||||
| family | PTHR12322 | ||||||||
| NCBI | gene | 190512 | |||||||
| RefSeq | protein | NM_067904.4 | |||||||
| TREEFAM | TREEFAM_ID | TF316165 | |||||||
| TrEMBL | UniProtAcc | Q95XU1 | |||||||
| UniProt_GCRP | UniProtAcc | Q95XU1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 26 Oct 2010 14:05:22 | WBPerson2970 | Name_change | CGC_name | dmd-9 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dmd | ||||||||
| Allele (26) | |||||||||
| Possibly_affected_by | WBVar02159006 | ||||||||
| Strain | WBStrain00032019 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00003100 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00003114 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00007058 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00007929 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00012832 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00017326 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00019521 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00020708 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00007776 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II and sex differentiation. Predicted to be located in nucleus. Expressed in several structures, including body wall musculature; coelomocyte; intestine; neurons; and somatic nervous system. Is an ortholog of human DMRTB1 (DMRT like family B with proline rich C-terminal 1); DMRTC1 (DMRT like family C1); and DMRTC1B (DMRT like family C1B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y67D8A.3 | |||||||
| Corresponding_transcript | Y67D8A.3.1 | ||||||||
| Other_sequence | Acan_isotig07129 | ||||||||
| Dviv_isotig20721 | |||||||||
| Dviv_isotig20722 | |||||||||
| Oden_isotig17838 | |||||||||
| OOC02539_1 | |||||||||
| HBC00796_1 | |||||||||
| Oden_isotig17837 | |||||||||
| Tcol_isotig14629 | |||||||||
| DN152829.1 | |||||||||
| Associated_feature | WBsf995901 | ||||||||
| WBsf995902 | |||||||||
| WBsf1017039 | |||||||||
| WBsf229871 | |||||||||
| Transcription_factor | WBTranscriptionFactor001148 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00021275 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057988 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7738 | ||||||||
| Expr16432 | |||||||||
| Expr1015077 | |||||||||
| Expr1039705 | |||||||||
| Expr1161413 | |||||||||
| Expr2010960 | |||||||||
| Expr2029199 | |||||||||
| Drives_construct | WBCnstr00012883 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (159) | |||||||||
| Interaction | WBInteraction000528077 | ||||||||
| Map_info | Map | IV | Position | -5.26488 | Error | 0.083085 | |||
| Positive | Positive_clone | Y67D8A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00064718 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
