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WormBase Tree Display for Gene: WBGene00033672

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Name Class

WBGene00033672SMapS_parentSequencecb25.fpc2888a2
IdentityVersion2
NameCGC_nameCbr-unc-87From_analysisInferred_from_orthology
Sequence_nameCBG12778
Molecular_nameCBG12778a
CBG12778a.1
CBP46654
CBG12778b
CBP17581
CBG12778b.1
Other_nameCBG_12778Accession_evidenceNDBHE600940
Public_nameCbr-unc-87
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-unc-87
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:0000002337.266From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
432.26From_analysisRNASeq.briggsae.WBls:0000002.control_mean
472.107From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
487.406From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
204.864From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
375.411From_analysisRNASeq.briggsae.WBls:0000002.control_mean
404.686From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.443158From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
4.87593From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
9.3087From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
13.0243From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
7.59205From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000431.9736From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
34.4049From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
36.8361From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
36.6261From_analysisRNASeq.briggsae.WBls:0000004.control_mean
37.5252From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
38.0451From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
38.7506From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:0000027113.407From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
246.132From_analysisRNASeq.briggsae.WBls:0000027.control_mean
257.541From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
367.449From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
296.293From_analysisRNASeq.briggsae.WBls:0000027.control_mean
312.495From_analysisRNASeq.briggsae.WBls:0000027.control_median
446.776From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035322.73From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038261.355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
362.252From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
369.184From_analysisRNASeq.briggsae.WBls:0000038.control_median
374.231From_analysisRNASeq.briggsae.WBls:0000038.control_mean
376.115From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
497.203From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:0000041128.253From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
226.276From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
233.04From_analysisRNASeq.briggsae.WBls:0000041.control_median
239.804From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
319.634From_analysisRNASeq.briggsae.WBls:0000041.control_mean
684.204From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
268.237From_analysisRNASeq.briggsae.WBls:0000041.control_median
296.669From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
362.155From_analysisRNASeq.briggsae.WBls:0000041.control_mean
597.724From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:0000063268.831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
288.24From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
288.427From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
301.491From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
320.636From_analysisRNASeq.briggsae.WBls:0000063.control_mean
456.192From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
289.036From_analysisRNASeq.briggsae.WBls:0000063.control_median
289.645From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
315.471From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101280.868From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
288.427From_analysisRNASeq.briggsae.total_over_all_stages.control_median
266.005From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
288.333From_analysisRNASeq.briggsae.total_over_all_stages.control_median
OrthologWBGene00006819Caenorhabditis elegansFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00056204Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00139841Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00138970Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00131525Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g10647Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10883Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g19887Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g3027Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16920Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g4194Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g6900Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g9538Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g9343Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g5924Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00461.g11128Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_07630.g21019Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-87Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold539.g3338Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01032.g17751Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_13431Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001883Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05654Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g9856Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10342810Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00223447Brugia malayiFrom_analysisWormBase-Compara
chrI_pilon.g1238Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00237669Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00096231Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00262120Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00288562Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00029225Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033088Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033441Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035326Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036614Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00038301Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039390Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Calponin family repeat and Calponin repeat. Is an ortholog of C. elegans unc-87. In C. elegans, unc-87 is involved in actin cytoskeleton organization and negative regulation of muscle filament sliding.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12778a
CBG12778b
Corresponding_CDS_history (2)
Corresponding_transcriptCBG12778a.1
CBG12778b.1
Other_sequence (443)
Experimental_infoExpr_patternExpr1055906
Microarray_resultsGPL8303_CB6_WBGene00033672_A
GPL8303_CB6_WBGene00033672_B
GPL14143_CBG12778_955-1014_0.912_10_B
GPL14143_CBG12778_1060-1119_0.923_5_C
GPL14143_CBG12778_1488-1547_0.918_8_A
MethodGene