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WormBase Tree Display for Gene: WBGene00036414

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Name Class

WBGene00036414SMapS_parentSequencecb25.fpc4044a
IdentityVersion2
NameCGC_nameCbr-ceh-20From_analysisInferred_from_orthology
Sequence_nameCBG16494
Molecular_nameCBG16494a
CBG16494a.1
CBP10318
CBG16494b
CBP38597
CBG16494b.1
CBG16494b.2
Other_nameCBG_16494Accession_evidenceNDBHE600949
Public_nameCbr-ceh-20
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:06WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-ceh-20
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classceh
RNASeq_FPKMWBls:000000223.5872From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
31.1605From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
42.6041From_analysisRNASeq.briggsae.WBls:0000002.control_mean
73.0645From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
18.4045From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
27.3738From_analysisRNASeq.briggsae.WBls:0000002.control_median
36.5542From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000376.6592From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
81.7281From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
86.7969From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
62.9808From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
75.479From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004138.013From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
143.24From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
148.467From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
135.709From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
147.126From_analysisRNASeq.briggsae.WBls:0000004.control_mean
150.909From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
162.53From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000272.1738From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
23.5697From_analysisRNASeq.briggsae.WBls:0000027.control_mean
62.2004From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
6.33501From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
27.2315From_analysisRNASeq.briggsae.WBls:0000027.control_median
29.7093From_analysisRNASeq.briggsae.WBls:0000027.control_mean
48.1279From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003538.0473From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003825.8782From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
28.5776From_analysisRNASeq.briggsae.WBls:0000038.control_mean
33.6107From_analysisRNASeq.briggsae.WBls:0000038.control_median
3.86032From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
41.3433From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
43.2285From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004110.4824From_analysisRNASeq.briggsae.WBls:0000041.control_median
11.0222From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
11.128From_analysisRNASeq.briggsae.WBls:0000041.control_mean
14.6494From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
8.89782From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
9.94256From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
12.4811From_analysisRNASeq.briggsae.WBls:0000041.control_median
12.6978From_analysisRNASeq.briggsae.WBls:0000041.control_mean
13.94From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
17.7348From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006314.9847From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
4.48962From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.86879From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
5.90663From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
7.54233From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
7.55841From_analysisRNASeq.briggsae.WBls:0000063.control_mean
10.0504From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
6.72448From_analysisRNASeq.briggsae.WBls:0000063.control_median
7.97374From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010125.8782From_analysisRNASeq.briggsae.total_over_all_stages.control_median
40.0246From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
28.5194From_analysisRNASeq.briggsae.total_over_all_stages.control_median
46.8711From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00139812
00139813
00139814
Ortholog (31)
ParalogWBGene00027778Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032103Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042654Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity and DNA-binding transcription factor activity. Predicted to be located in nucleus. Is an ortholog of C. elegans ceh-20. In C. elegans, ceh-20 is involved in several processes, including cell differentiation; positive regulation of mesodermal cell fate specification; and regulation of asymmetric cell division.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG16494a
CBG16494b
Corresponding_CDS_historyCBG16494:bp194
Corresponding_transcriptCBG16494a.1
CBG16494b.1
CBG16494b.2
Other_sequence (66)
Experimental_infoExpr_patternExpr1062355
Microarray_resultsGPL8303_CB6_WBGene00036414_A
GPL8303_CB6_WBGene00036414_B
GPL14143_CBG16494_267-326_0.912_13_A
GPL14143_CBG16494_398-457_0.887_30_C
GPL14143_CBG16494_583-642_0.919_10_B
ReferenceWBPaper00030889
MethodGene