WormBase Tree Display for Gene: WBGene00027778

WBGene00027778 SMap: S_parent: Sequence: cb25.fpc0106
  Identity: Version: 2
    Name: CGC_name: Cbr-ceh-40 From_analysis: Inferred_from_orthology
      Sequence_name: CBG05292
      Molecular_name: CBG05292
        CBG05292.1
        CBP07031
      Other_name: CBG_05292 Accession_evidence: NDB HE601042
      Public_name: Cbr-ceh-40
    DB_info: Database: NDB locus_tag CBG_05292
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:57 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbr-ceh-40
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ceh
    Allele: WBVar00110282
      WBVar00110283
      WBVar00110284
      WBVar00110285
    RNASeq_FPKM: WBls:0000002 1.1231 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        1.43327 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        1.43392 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        1.7428 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        1.56932 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        1.58836 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        1.97745 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 67.2034 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        70.1648 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        73.1262 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        67.206 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        69.1785 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 39.8395 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        43.6469 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        47.4543 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        37.545 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        43.8639 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        43.9555 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        51.0748 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 0.310914 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
        0.363908 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        0.394235 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
        0.477557 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
        0.626405 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
        0.667163 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        0.790439 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
        0.406481 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
        1.03994 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
      WBls:0000027 0.091622 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.274865 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.115694 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.126563 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.231388 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 0.193811 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.076281 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        0.111116 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        0.145951 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        0.174688 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        0.476522 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 0.390911 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        4.35382 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        5.58346 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        5.59416 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        5.60486 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        5.83606 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.504221 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        1.20726 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        3.18779 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        3.39536 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
      WBls:0000063 0.271351 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0.332103 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0.446539 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        0.644659 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        2.1733 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.389321 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        0.839804 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        1.81553 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 0.446539 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        8.79948 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.585692 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        12.1213 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00131221
      00131222
      00131223
    Ortholog (16)
    Paralog: WBGene00032103 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036414 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00042654 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA binding activity and DNA-binding transcription factor activity. Predicted to be located in nucleus. Is an ortholog of C. elegans ceh-40. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG05292
    Corresponding_CDS_history: CBG05292:bp194
    Corresponding_transcript: CBG05292.1
    Other_sequence: Name_isotig00510
  Experimental_info: Expr_pattern: Expr1051343
    Microarray_results: GPL8303_CB6_WBGene00027778_A
      GPL8303_CB6_WBGene00027778_B
      GPL14143_CBG05292_374-433_0.825_28_C
      GPL14143_CBG05292_566-625_0.864_4_B
      GPL14143_CBG05292_619-678_0.839_23_A
  Reference: WBPaper00030889
  Method: Gene