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WormBase Tree Display for Gene: WBGene00055730

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Name Class

WBGene00055730SMapS_parentSequenceCrem_Contig12
IdentityVersion3
NameCGC_nameCre-unc-69From_analysisInferred_from_orthology
Sequence_nameCRE04587
Molecular_nameCRE04587
CRE04587.1
RP29191
Other_namecr01.sctg5.wum.441
Public_nameCre-unc-69
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
203 Jul 2008 11:44:58WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE04587
Other_namecr01.sctg5.wum.441
304 Jul 2008 11:06:36WBPerson4055Name_changeCGC_nameCre-unc-69
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000000456.3077From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
66.5342From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
76.7608From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:00000272.45885From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
43.2127From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
48.798From_analysisRNASeq.remanei.WBls:0000027.control_mean
52.9756From_analysisRNASeq.remanei.WBls:0000027.control_median
62.7384From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
86.782From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
WBls:000003833.3287From_analysisRNASeq.remanei.WBls:0000038.control_mean
40.2055From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
51.0663From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
8.71421From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:0000041118.537From_analysisRNASeq.remanei.WBls:0000041.control_median
125.304From_analysisRNASeq.remanei.WBls:0000041.control_mean
160.195From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
191.84From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
198.883From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
59.4912From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
64.5355From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
76.8792From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:0000063 (12)
WBls:000010147.1395From_analysisRNASeq.remanei.total_over_all_stages.control_median
58.2532From_analysisRNASeq.remanei.total_over_all_stages.control_mean
OrthologWBGene00006802Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00042681Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00161369Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00109470Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00120626Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00217114Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00225889Brugia malayiFrom_analysisWormBase-Compara
WBGene00245979Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g4327Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g7270Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14955Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g9527Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15240Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g2661Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g15889Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g3087Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g22519Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g476Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00280.g8411Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-69Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold628.g7395Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00332.g9569Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_13494Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010498Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08111Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g22478Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30119300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g8843Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00258941Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00293073Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: Short coiled-coil protein. Is an ortholog of C. elegans unc-69. In C. elegans, unc-69 is involved in regulation of axon extension and regulation of synapse organization.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE04587
Corresponding_transcriptCRE04587.1
Other_sequence (61)
Experimental_infoExpr_patternExpr1116661
Microarray_resultsGPL14146_CRE04587_192-251_0.731_23_A
GPL14146_CRE04587_75-134_0.937_2_C
GPL14146_CRE04587_99-158_0.850_13_B
MethodGene