WormBase Tree Display for Gene: WBGene00060094

WBGene00060094 SMap: S_parent: Sequence: Crem_Contig9
  Identity: Version: 3
    Name: CGC_name: Cre-cpn-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE29711
      Molecular_name: CRE29711
        CRE29711.1
        RP33720
      Other_name: cr01.sctg16.wum.263
      Public_name: Cre-cpn-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:43 WBPerson2970 Name_change: CGC_name: Cre-cpn-1
        3 03 Jul 2008 11:45:30 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE29711
                Other_name: cr01.sctg16.wum.263
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cpn
    RNASeq_FPKM: WBls:0000004 66.7017 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        76.8455 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        86.9893 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 21.7237 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        22.1293 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        22.5675 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        23.0057 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        35.0329 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        6.72676 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 24.7361 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        50.0232 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        56.5029 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        68.8306 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 250.035 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        284.995 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        310.564 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        314.434 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        319.309 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        324.183 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        338.93 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        350.806 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 (12)
      WBls:0000101 126.75 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        93.2938 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    Ortholog (35)
    Paralog: WBGene00056029 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00064707 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00062365 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00051281 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00052222 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00056204 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00056433 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Calponin family repeat; Calponin repeat; Smooth muscle protein/calponin; CH domain superfamily; Calponin homology domain; and Calponin homology (CH) domain. Is an ortholog of C. elegans cpn-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE29711
    Corresponding_transcript: CRE29711.1
    Other_sequence (89)
  Experimental_info: Expr_pattern: Expr1100767
    Microarray_results: GPL14146_CRE29711_205-264_0.912_14_B
      GPL14146_CRE29711_248-307_0.923_11_C
      GPL14146_CRE29711_559-618_0.978_1_A
  Method: Gene