WormBase Tree Display for Gene: WBGene00064707

WBGene00064707 SMap: S_parent: Sequence: Crem_Contig30
  Identity: Version: 3
    Name: CGC_name: Cre-cpn-2 From_analysis: Inferred_from_orthology
      Sequence_name: CRE17902
      Molecular_name: CRE17902
        CRE17902.1
        RP02905
      Other_name: cr01.sctg51.wum.92
      Public_name: Cre-cpn-2
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:43 WBPerson2970 Name_change: CGC_name: Cre-cpn-2
        3 03 Jul 2008 11:46:00 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE17902
                Other_name: cr01.sctg51.wum.92
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cpn
    RNASeq_FPKM: WBls:0000004 11.3525 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        11.7626 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        12.1726 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 25.455 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        37.7006 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        43.8203 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        49.94 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        52.6232 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        97.3971 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 29.1372 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        60.8313 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        76.4317 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        76.925 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 2.15782 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        3.92935 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        4.41816 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        4.53421 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        4.67105 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        4.92395 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        5.64864 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        6.12732 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
        2.63397 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
        3.60517 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
        3.6067 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        3.68761 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        3.77005 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        5.82415 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        5.94482 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        6.1021 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        8.18671 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
      WBls:0000101 18.4532 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        5.88448 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    Ortholog (41)
    Paralog: WBGene00056029 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00060094 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00062365 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00051281 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00052222 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00056204 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00056433 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Calponin family repeat; Calponin repeat; Smooth muscle protein/calponin; CH domain superfamily; Calponin homology domain; and Calponin homology (CH) domain. Is an ortholog of C. elegans cpn-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE17902
    Corresponding_transcript: CRE17902.1
    Other_sequence (34)
  Experimental_info: Expr_pattern: Expr1093775
    Microarray_results: GPL14146_CRE17902_151-210_0.922_5_B
      GPL14146_CRE17902_490-549_0.930_3_C
      GPL14146_CRE17902_549-608_0.936_1_A
  Method: Gene