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WormBase Tree Display for Gene: WBGene00073350

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Name Class

WBGene00073350SMapS_parentSequenceCrem_Contig697
IdentityVersion3
NameCGC_nameCre-cng-3From_analysisInferred_from_orthology
Sequence_nameCRE11547
Molecular_nameCRE11547
CRE11547.1
RP27203
Other_namecr01.sctg711.wum.4
Public_nameCre-cng-3
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:29WBPerson1847EventCreated
203 Jul 2008 11:46:40WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE11547
Other_namecr01.sctg711.wum.4
320 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCre-cng-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcng
RNASeq_FPKMWBls:00000040.031835From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
0.063669From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:00000270.1291From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
1.16927From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
1.35853From_analysisRNASeq.remanei.WBls:0000027.control_mean
1.59879From_analysisRNASeq.remanei.WBls:0000027.control_median
2.02831From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
2.10745From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:00000381.20343From_analysisRNASeq.remanei.WBls:0000038.control_mean
1.76083From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
1.84947From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:00000410.052016From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
0.059408From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
0.078103From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
0.082573From_analysisRNASeq.remanei.WBls:0000041.control_median
0.087044From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
0.121882From_analysisRNASeq.remanei.WBls:0000041.control_mean
0.159698From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
0.295025From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
WBls:00000630.228097From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
0.326215From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
0.34223From_analysisRNASeq.remanei.WBls:0000063.control_median
0.358246From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
0.50023From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
0.574125From_analysisRNASeq.remanei.WBls:0000063.control_mean
0.655143From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
0.682508From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
2.99081From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
WBls:00001010.193898From_analysisRNASeq.remanei.total_over_all_stages.control_median
0.599256From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00166923
00166924
00166925
00166926
OrthologWBGene00000563Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00045213Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00129079Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00142813Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00193894Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00216704Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00278727Pristionchus pacificusFrom_analysisWormBase-Compara
CBOVI.g11034Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g12679Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g17269Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g19307Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g7834Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g26785Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g4654Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g8146Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g4173Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g22147Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00903.g14854Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_04361.g18790Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-cng-3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_IV.g13158Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g8196Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01318.g20077Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_10033Caenorhabditis latensFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03364Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g20547Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40343500Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g11325Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00055150Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00068887Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00068888Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00070259Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00070409Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00059947Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00061624Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00062089Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00086104Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable monoatomic ion channel activity. Predicted to be involved in monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans cng-3. In C. elegans, cng-3 is involved in multicellular organismal reproductive process; positive regulation of growth rate; and response to heat.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE11547
Corresponding_transcriptCRE11547.1
Other_sequenceDviv_isotig15882
MethodGene