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WormBase Tree Display for Gene: WBGene00045213

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Name Class

WBGene00045213SMapS_parentSequencecb25.fpc4260a
IdentityVersion4
NameCGC_nameCbr-cng-3From_analysisInferred_from_orthology
Sequence_nameCBG25106
Molecular_nameCBG25106
CBG25106.1
CBP47634
Other_nameCBG_25106Accession_evidenceNDBHE601000
Public_nameCbr-cng-3
DB_infoDatabaseNDBlocus_tagCBG_25106
SpeciesCaenorhabditis briggsae
HistoryVersion_change120 Dec 2006 11:57:57WBPerson1847EventCreated
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbr-cng-3
308 Feb 2019 15:42:27WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:23WBPerson1983Name_changeCGC_nameCbr-cng-3
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:27WBPerson1983Name_changeCGC_nameCbr-cng-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcng
RNASeq_FPKMWBls:00000020.037202From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.117651From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.118859From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.201723From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.022446From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.077427From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.094756From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.026599From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.053199From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.017733From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.085094From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.245327From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.40556From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.09756From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.250679From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.323382From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.341801From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.123639From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.137891From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.233026From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.140939From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.165366From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.19284From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.161523From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.0596From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.119199From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.127492From_analysisRNASeq.briggsae.WBls:0000038.control_mean
0.390768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.027099From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.038144From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.068641From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.081159From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.099139From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.160253From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.070154From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
0.084647From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.08533From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.117189From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630From_analysisRNASeq.briggsae.WBls:0000063.control_mean
RNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.085094From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.124227From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.091327From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.125473From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00146160
00146161
00146162
00146163
Ortholog (28)
ParalogWBGene00028880Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029133Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032686Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033375Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036641Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039233Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041056Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable monoatomic ion channel activity. Predicted to be involved in monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans cng-3. In C. elegans, cng-3 is involved in multicellular organismal reproductive process; positive regulation of growth rate; and response to heat.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG25106
Corresponding_CDS_historyCBG25106:bp194
CBG25106:bp257
Corresponding_transcriptCBG25106.1
Other_sequenceBXC01404_1
JI171402.1
Oden_isotig22868
Dviv_isotig15882
Experimental_infoExpr_patternExpr1059342
Microarray_resultsGPL14143_CBG25106_949-1008_0.881_23_B
GPL14143_CBG25106_1172-1231_0.896_18_A
GPL14143_CBG25106_1309-1368_0.807_74_C
Remark[190208 pad] The CGC name Cbr-cng-3 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Cbr-cng-3 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene