WormBase Tree Display for Gene: WBGene00104188
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WBGene00104188 | SMap | S_parent | Sequence | PPA_ChrV | ||
---|---|---|---|---|---|---|
Identity | Version | 5 | ||||
Name | CGC_name | Ppa-sqv-4 | From_analysis | Inferred_from_orthology | ||
Sequence_name | PPA14634 | |||||
Molecular_name | PPA14634 | |||||
PPA14634.1 | ||||||
PP64002 | ||||||
Other_name | GENEPREDICTION_SNAP300000071115 | |||||
GENEPREDICTION_SNAP300000071116 | ||||||
GENEPREDICTION_SNAP300000071117 | ||||||
UMM-S632-0.4 | Person_evidence | WBPerson606 | ||||
Ppa-unc-122 | Inferred_automatically | from gene merge | ||||
Public_name | Ppa-sqv-4 | |||||
Species | Pristionchus pacificus | |||||
History (2) | ||||||
Status | Live | |||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | sqv | |||||
RNASeq_FPKM | WBls:0000032 | 17.1051 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | ||
RNASeq.pristionchus.WBls:0000032.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||||||
WBls:0000101 | 11.6269 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||
17.1051 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||
17.7757 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||
RNASeq.pristionchus.WBls:0000101.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | ||||||
GO_annotation | 00179804 | |||||
00179805 | ||||||
00179806 | ||||||
Ortholog (41) | ||||||
Structured_description | Automated_description | Predicted to enable NAD binding activity and UDP-glucose 6-dehydrogenase activity. Is an ortholog of C. elegans sqv-4. In C. elegans, sqv-4 is involved in several processes, including egg-laying behavior; glycosaminoglycan biosynthetic process; and vulval development. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | PPA14634 | ||||
Corresponding_transcript | PPA14634.1 | |||||
Other_sequence (55) | ||||||
Experimental_info (2) | ||||||
Method | Gene |