WormBase Tree Display for Gene: WBGene00117763
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WBGene00117763 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Identity | Version | 2 | ||||
Name | CGC_name | Ppa-unc-54 | From_analysis | Inferred_from_orthology | ||
Sequence_name | PPA28209 | |||||
Molecular_name | PPA28209 | |||||
PPA28209.1 | ||||||
PP65746 | ||||||
Other_name | GENEPREDICTION_SNAP300000086626 | |||||
GENEPREDICTION_SNAP300000086627 | ||||||
UMA-S10-76.28 | Person_evidence | WBPerson606 | ||||
Public_name | Ppa-unc-54 | |||||
Species | Pristionchus pacificus | |||||
History | Version_change (2) | |||||
Acquires_merge | WBGene00117764 | |||||
Status | Live | |||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | unc | |||||
RNASeq_FPKM | WBls:0000032 | 4.86452 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | ||
RNASeq.pristionchus.WBls:0000032.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||||||
WBls:0000101 | 4.17463 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||
4.86452 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||
7.65936 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||
RNASeq.pristionchus.WBls:0000101.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | ||||||
GO_annotation | 00185954 | |||||
00185955 | ||||||
00185956 | ||||||
00185957 | ||||||
Ortholog (39) | ||||||
Paralog (20) | ||||||
Structured_description | Automated_description | Predicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Predicted to be part of myosin complex. Is an ortholog of C. elegans unc-54. In C. elegans, unc-54 is involved in several processes, including egg-laying behavior; muscle contraction; and skeletal muscle myosin thick filament assembly. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed (2) | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | PPA28209 | ||||
Corresponding_transcript | PPA28209.1 | |||||
Other_sequence (422) | ||||||
Experimental_info | Microarray_results | GPL14372_Probes_12539 | ||||
GPL14372_Probes_58913 | ||||||
GPL14372_Probes_58914 | ||||||
GPL14372_Probes_58915 | ||||||
GPL14372_Probes_58916 | ||||||
Expression_cluster | WBPaper00041207:PP_dauer_down | |||||
Method | Gene |