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WormBase Tree Display for Gene: WBGene00117763

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Name Class

WBGene00117763SMapS_parentSequencePPA_ChrII
IdentityVersion2
NameCGC_namePpa-unc-54From_analysisInferred_from_orthology
Sequence_namePPA28209
Molecular_namePPA28209
PPA28209.1
PP65746
Other_nameGENEPREDICTION_SNAP300000086626
GENEPREDICTION_SNAP300000086627
UMA-S10-76.28Person_evidenceWBPerson606
Public_namePpa-unc-54
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:07WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:51WBPerson4055EventAcquires_mergeWBGene00117764
Acquires_mergeWBGene00117764
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000324.86452From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001014.17463From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
4.86452From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
7.65936From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00185954
00185955
00185956
00185957
OrthologWBGene00006789Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00038900Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00060889Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00147183Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00131142Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00223568Brugia malayiFrom_analysisWormBase-Compara
WBGene00224377Brugia malayiFrom_analysisWormBase-Compara
WBGene00242128Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246956Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g9085Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g6392Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g5864Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8240Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g4259Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g22272Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9281Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g14410Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g1808Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12497Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00825.g14408Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_15248.g24974Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_20149.g26399Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_20485.g26465Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_22390.g26850Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_26821.g27466Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_27168.g27507Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_27639.g27559Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_I.g3807Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold572.g4325Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01801.g23223Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_06941.g37197Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_09136Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001454Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02608Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g2033Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10010600Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g2982Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00266272Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00292203Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00092885Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00094599Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00094650Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00095254Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096377Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00099093Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00100884Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00104201Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00105359Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00105754Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00113196Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00114548Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00116910Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00117765Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00118520Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00205642Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00206056Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00274172Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00274296Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00275094Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Predicted to be part of myosin complex. Is an ortholog of C. elegans unc-54. In C. elegans, unc-54 is involved in several processes, including egg-laying behavior; muscle contraction; and skeletal muscle myosin thick filament assembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA28209
Corresponding_transcriptPPA28209.1
Other_sequenceMC01153
FK800834.1
FK803228.1
Tcol_isotig13978
FD515988.1
GO239796.1
SS01266
FK802903.1
CK726257.1
SRC00350_1
EX562007.1
JI164035.1
Dviv_isotig22437
JI222641.1
Name_isotig05674
CRC01235_1
AA614882.1
AS10237
HG01183
MI00750
SSC02549_1
ASC00825_1
GW408504.1
BM00094
AS03854
OF01565
BF154347.1
FD517291.1
BMC04837_1
Hbac_isotig01910
ASC00207_1
CK850194.1
GR13903
MAC03014_1
ASC02413_1
FC548944.1
JO468111.1
FK802688.1
FK799864.1
Name_isotig08017
CB013433.1
BE346041.1
CSC01171_1
FK809088.1
HGC01071_1
HBC07402_1
GP01619
ASC00523_1
FC551068.1
FK802252.1
WBC00112_1
BM174471.1
GE638053.1
SRC00620_1
GE639126.1
BMC08022_1
FC816852.1
Oden_isotig13910
AI444867.1
SS01012
CRC01451_1
FK809813.1
EY470053.1
TX00342
GRC00377_1
BMC07481_1
FK805160.1
FK801903.1
GO240127.1
ES880283.1
HBC10434_1
GE638182.1
HG01154
PT02306
FK801307.1
FC814910.1
FK804192.1
JO470194.1
ES413568.1
FK803904.1
AW980220.1
GE638943.1
SRC07433_1
GPC01051_1
MI02292
FK802273.1
GE639480.1
BMC00967_1
FK804282.1
SS02030
JI476535.1
EX828303.1
AW980250.1
TX00627
JI464208.1
Acan_isotig12123
FC809602.1
OFC00838_1
AY033438.1
FC551024.1
BU585796.1
BE239264.1
SSC02920_1
AA934255.1
GO239982.1
BE238887.1
ALC01112_1
TMC00225_1
FC810432.1
FC815406.1
CBC01328_1
CJC00163_1
GE639006.1
EX560406.1
FC815757.1
SR01540
OFC01265_1
JO468000.1
WBC01458_1
FK800838.1
GR13776
FF678883.1
Oden_isotig22472
SSC02665_1
FK808654.1
GW408626.1
MI03206
JI463067.1
CK850660.1
CJC06342_1
MHC00530_1
CK850691.1
MJ04760
AS10275
ACC04924_1
OVC01434_1
ASC01109_1
TX00149
M74066.1
CRC05376_1
CD374543.1
ASC00695_1
AW506156.1
Dviv_isotig12023
FF678583.1
BXC06224_1
BMC08338_1
TX01599
EX536602.1
MC03213
PSC00716_2
ACC32497_1
TM00913
EX562853.1
FG973998.1
PTC00715_1
JI225655.1
OF01566
SS00586
GW406531.1
GW411808.1
FC817242.1
CGC01488_1
MIC01297_1
CR08093
TDC02520_1
CK850717.1
SSC02751_1
BE720947.1
MAC00347_1
HBC04132_1
GO240453.1
ACC10410_1
SSC05741_1
TCC01553_1
FC811340.1
CRC09156_1
FK809409.1
CK726210.1
Acan_isotig02405
MI00805
FK805041.1
AE04477
Oden_isotig26859
EX910301.1
FC815839.1
AS04312
CK855384.1
BMC11979_1
JO473873.1
GE639009.1
SS01320
JI164158.1
AS10169
JI464393.1
AF285862.1
FC810776.1
AS03650
Oden_isotig13911
FC817625.1
JO471421.1
BMC01818_1
TCC01675_1
MI00081
FK800073.1
MH02583
JO469312.1
ES411192.1
BMC00462_1
FK807651.1
BMC11521_1
TCC00759_1
FK808580.1
CK850816.1
CK855346.1
FK800059.1
FK801377.1
DI00651
Oden_isotig25532
FG981100.1
XIC01132_1
FK803567.1
FF681879.1
GW714085.1
JI170526.1
PP00570
PT01294
WBC00466_1
BXC04243_1
FK808519.1
EF413918.1
XIC03304_1
AS10535
FK802965.1
ASC00719_1
JI164070.1
SS00286
GE639449.1
Acan_isotig20126
AS09216
ASC00666_1
FK803554.1
MIC00621_1
Tcir_isotig29271
FC810037.1
HC05486
FK808067.1
FK809631.1
MA03051
GE638718.1
FC811672.1
JI464273.1
FK810036.1
SS00275
CJC04551_1
PTC00496_1
FC549000.1
JK314777.1
AS00858
CR01812
CR02142
FK806882.1
FK809579.1
WBC02640_1
ASC01028_1
MIC00114_1
FG350486.1
PT01504
XI04659
FK805089.1
JI219415.1
XIC00221_1
FG588741.1
AW755255.1
SS01504
JI242985.1
ASC00526_1
CSC01933_1
EX548851.1
SSC05673_1
FC554224.1
CRC06691_1
CB013153.1
MA00415
Dviv_isotig12022
EX550450.1
FK809888.1
CK850503.1
CK855002.1
JO469097.1
FK803955.1
DA02675
AS03804
CBC04770_1
FK809432.1
Acan_isotig08714
EY460217.1
Hbac_isotig01056
BMC01437_1
HBC00743_1
CK850507.1
CGC00627_1
AS01129
FK801172.1
SRC04394_1
TLC00087_1
SRC00545_1
FK809070.1
JI240333.1
FK808838.1
PPC19682_1
GE638410.1
FK801269.1
GO240501.1
ASC02443_1
AM743395.1
BM00854
GW714083.1
Acan_isotig07778
JO469218.1
GW409454.1
FC810361.1
CRC07461_1
CK850396.1
FK802424.1
FK802952.1
ASC00882_1
JI165145.1
TX01584
FK799932.1
XI01064
EX501725.1
PTC01719_1
FK801961.1
FK804028.1
CRC07678_1
HBC18180_1
FK802178.1
JO473402.1
MI04341
FK803367.1
ACC00594_1
Oden_isotig13909
OFC01032_1
TS01157
GO239410.1
FK801080.1
XIC05237_1
FK800698.1
FK808403.1
MCC00122_1
CK850254.1
JI166656.1
XI04746
FK808943.1
ASC26237_1
OVC00458_1
SSC02445_1
AS10547
BXC02747_1
PSC01865_1
FK803615.1
CK855040.1
FK800573.1
BMC05557_1
AW682850.1
BE636486.1
AJ306290.1
FK800886.1
MI03844
JI182444.1
MJC03903_1
AS03889
XI00409
AS08529
OOC00515_1
FC816221.1
EX500774.1
TDC02603_1
HGC03857_1
FK802160.1
GE637974.1
DIC00460_1
HCC00370_1
FK807638.1
Dviv_isotig22436
GW406439.1
MIC00886_1
FC551618.1
MIC00114_2
CK855035.1
CV199639.1
EX562479.1
HGC01358_1
CK854771.1
PPC00062_1
EL740219.1
AW682828.1
AYC04367_1
PVC00588_1
AS10158
FK808102.1
Dviv_isotig34641
CD455920.1
FF679121.1
CR03585
FF678167.1
FK801350.1
AM743336.1
SR01001
Dviv_isotig25139
AS10125
GO240017.1
PT03030
EE724181.1
OF01389
AS04080
FC815009.1
FK808900.1
FK803153.1
AM743523.1
GW714084.1
Experimental_infoMicroarray_resultsGPL14372_Probes_12539
GPL14372_Probes_58913
GPL14372_Probes_58914
GPL14372_Probes_58915
GPL14372_Probes_58916
Expression_clusterWBPaper00041207:PP_dauer_down
MethodGene