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WormBase Tree Display for Gene: WBGene00130810

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Name Class

WBGene00130810SMapS_parentSequenceCjap.Contig18213
IdentityVersion3
NameCGC_nameCjp-cgef-1From_analysisInferred_from_orthology
Sequence_nameCJA11606
Molecular_nameCJA11606
CJA11606.1
JA43004
Other_nameCjp-tag-150From_analysisInferred_from_orthology
Public_nameCjp-cgef-1
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:22WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-tag-150
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
320 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCjp-cgef-1
Other_nameCjp-tag-150
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcgef
RNASeq_FPKMWBls:000000419.1306From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002723.7915From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003811.9845From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
12.7664From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
13.5483From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:000004110.0962From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
10.2461From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
3.00129From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
3.77592From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
4.14855From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
4.45262From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
5.29554From_analysisRNASeq.japonica.WBls:0000041.control_median
6.13845From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
6.34392From_analysisRNASeq.japonica.WBls:0000041.control_mean
8.8922From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
WBls:00001018.8922From_analysisRNASeq.japonica.total_over_all_stages.control_median
9.16971From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00195884
OrthologWBGene00006496Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00015704Caenorhabditis elegansFrom_analysisTreeFam
WBGene00022391Caenorhabditis elegansFrom_analysisTreeFam
WBGene00025188Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00058199Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00060975Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00062415Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00143731Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00140788Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00151784Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00193203Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00139243Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00139266Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00141265Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00141359Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00154338Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00222450Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g3565Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g2282Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g18851Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g18852Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g18853Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15740Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g15741Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g21874Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5705Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g21721Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g1278Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12544Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00327.g9264Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_X.g23002Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_X.g23003Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_X.g23004Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold582.g4660Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold582.g4661Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01173.g18994Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01173.g18995Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01038Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_01039Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_023865Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g14077Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g16774Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0096900Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00058197Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00058198Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00111213Pristionchus pacificusFrom_analysisWormBase-Compara
chrX_pilon.g18657Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00240083Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240084Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240086Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00264179Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00290606Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00129233Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00138393Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00215416Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00122877Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00126129Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00127682Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00131668Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00137899Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00182741Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00218818Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable guanyl-nucleotide exchange factor activity. Is an ortholog of C. elegans cgef-1. In C. elegans, cgef-1 is involved in protein localization.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA11606
Corresponding_transcriptCJA11606.1
Other_sequence (37)
Experimental_infoExpr_patternExpr1070365
Expr1079605
Expr1084588
Microarray_resultsGPL14145_CJA11606_1659-1718_0.909_15_C
GPL14145_CJA11606_1776-1835_0.957_1_A
GPL14145_CJA11606_1891-1950_0.947_3_B
GPL14145_CJA16814_674-733_0.937_2_A
GPL14145_CJA16814_800-859_0.802_31_C
GPL14145_CJA16814_806-865_0.924_7_B
GPL14145_CJA22709_70-129_0.951_1_A
MethodGene