Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00139841

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00139841SMapS_parentSequenceCbre_Contig98
IdentityVersion2
NameCGC_nameCbn-unc-87.2From_analysisInferred_from_orthology
Sequence_nameCBN01116
Molecular_nameCBN01116
CBN01116.1
CN07075
Public_nameCbn-unc-87.2
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:50WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameCbn-unc-87.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040.68212From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
1.36424From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:0000024113.144From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
169.63From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
193.836From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
200.874From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
84.274From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
WBls:0000038188.002From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
192.363From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
196.725From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (17)
WBls:0000101100.745From_analysisRNASeq.brenneri.total_over_all_stages.control_median
141.654From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
OrthologWBGene00006819Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00033672Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00056204Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00131525Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g10647Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10883Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g19887Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g3027Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16920Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g4194Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g6900Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g9538Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g9343Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g5924Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00461.g11128Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_07630.g21019Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-87Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold539.g3338Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01032.g17751Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_13431Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001883Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05654Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g9856Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10342810Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00096231Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00223447Brugia malayiFrom_analysisWormBase-Compara
chrI_pilon.g1238Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00237669Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00262120Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00288562Trichuris murisFrom_analysisWormBase-Compara
Paralog (11)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Calponin family repeat and Calponin repeat. Is an ortholog of C. elegans unc-87. In C. elegans, unc-87 is involved in actin cytoskeleton organization and negative regulation of muscle filament sliding.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN01116
Corresponding_transcriptCBN01116.1
Other_sequence (152)
MethodGene