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WormBase Tree Display for Gene: WBGene00161361

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Name Class

WBGene00161361SMapS_parentSequenceCbre_Contig148
IdentityVersion2
NameCGC_nameCbn-unc-17.1From_analysisInferred_from_orthology
Sequence_nameCBN22636
Molecular_nameCBN22636
CBN22636.1
CN29280
Public_nameCbn-unc-17.1
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:52WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbn-unc-17.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040.306181From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0.612362From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:000002415.8894From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
22.3276From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
23.566From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
24.9409From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
28.6046From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:00000382.80459From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
3.06582From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
3.32706From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (14)
WBls:00001010.830383From_analysisRNASeq.brenneri.total_over_all_stages.control_median
1.74876From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00220531
00220532
00220533
00220534
00220535
OrthologWBGene00006756Caenorhabditis elegansFrom_analysisOMA
WBGene00030124Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WBGene00059160Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00075967Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00127559Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g10957Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g4942Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g20536Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g21707Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g7394Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g7865Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g10538Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g18303Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g7720Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g14104Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00765.g13988Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_10993.g22984Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-17Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00165.g6067Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00165.g6068Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_21389Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_015031Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g7413Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40085300Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00075935Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00227647Brugia malayiFrom_analysisWormBase-Compara
chrIV_pilon.g10012Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00240688Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00267654Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00302799Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00150053Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00156191Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00190072Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00142525Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00143354Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00156258Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00160219Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192258Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00195044Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable xenobiotic transmembrane transporter activity. Predicted to be involved in transmembrane transport and xenobiotic transport. Predicted to be located in membrane. Is an ortholog of C. elegans unc-17. In C. elegans, unc-17 is involved in several processes, including cholinergic synaptic transmission; nematode larval development; and regulation of pharyngeal pumping.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN22636
Corresponding_CDS_historyCBN22636:np197
Corresponding_transcriptCBN22636.1
Other_sequence (14)
MethodGene