WormBase Tree Display for Gene: WBGene00271795
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| WBGene00271795 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y46C8AM.1 | |||||||
| Molecular_name | Y46C8AM.1 | ||||||||
| Y46C8AM.1.1 | |||||||||
| CE33872 | |||||||||
| Y46C8AM.1.2 | |||||||||
| Y46C8AM.1.3 | |||||||||
| Other_name | CELE_Y46C8AM.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y46C8AM.1 | ||||||||
| DB_info | Database | NDB | locus_tag | CELE_Y46C8AM.1 | |||||
| Panther | gene | CAEEL|WormBase=WBGene00271795|UniProtKB=U4PS59 | |||||||
| family | PTHR23062 | ||||||||
| NCBI | gene | 34700653 | |||||||
| RefSeq | protein | NM_001392288.1 | |||||||
| TrEMBL | UniProtAcc | U4PS59 | |||||||
| UniProt_GCRP | UniProtAcc | U4PS59 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 21 Sep 2017 14:34:34 | WBPerson4025 | Event | Split_from | WBGene00021586 | ||
| Split_from | WBGene00021586 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (52) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | CBOVI.g11167 | Caenorhabditis bovis | From_analysis | WormBase-Compara | |||||
| CSP21.g9529 | Caenorhabditis parvicauda | From_analysis | WormBase-Compara | ||||||
| CSP31.g19741 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
| CSP32.g15733 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
| CSP38.g4142 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
| Cang_2012_03_13_00447.g10960 | Caenorhabditis angaria | From_analysis | WormBase-Compara | ||||||
| chrIV_pilon.g10080 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (38) | |||||||||
| Structured_description | Automated_description | Is affected by several genes including daf-16; skn-1; and daf-18 based on RNA-seq and microarray studies. Is affected by nitroguanidine based on microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y46C8AM.1 | |||||||
| Corresponding_transcript | Y46C8AM.1.1 | ||||||||
| Y46C8AM.1.2 | |||||||||
| Y46C8AM.1.3 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00058944 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00069445 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056655 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013320 | Inferred_automatically | RNAi_primary | |||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (19) | |||||||||
| Map_info | Positive | Positive_clone | Y46C8AM | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -1.28451 | |||||||
| Method | Gene |
