Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00000263

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00000263EvidencePaper_evidenceWBPaper00004883
NamePublic_namear506
Other_nameF25D7.1.1:c.126G>A
CE09629:p.Trp42Ter
HGVSgCHROMOSOME_I:g.10400052C>T
Sequence_detailsSMapS_parentSequenceF25D7
Flanking_sequencestcatcaatgtacaatggatgtttctacaatggatctcgtagtcaacaagttccaggtacact
Mapping_targetF25D7
Type_of_mutationSubstitutiongaPaper_evidenceWBPaper00033458
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00008047
LaboratoryGS
StatusLive
AffectsGeneWBGene00000843
TranscriptF25D7.1.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScF25D7.1.1:c.126G>A
HGVSpCE09629:p.Trp42Ter
cDNA_position126
CDS_position126
Protein_position42
Exon_number1/4
Codon_changetgG/tgA
Amino_acid_changeW/*
InteractorWBInteraction000051453
WBInteraction000503998
GeneticsInterpolated_map_positionI4.9713
DescriptionPhenotype (2)
Phenotype_not_observedWBPhenotype:0000643Paper_evidenceWBPaper00004883
Curator_confirmedWBPerson712
RemarkAnimals had normal movement.Paper_evidenceWBPaper00004883
Curator_confirmedWBPerson712
Phenotype_assayGenotypedpy-20(e1282); arIs37[pmyo-3::ssGFP]Paper_evidenceWBPaper00004883
Curator_confirmedWBPerson712
ReferenceWBPaper00041076
WBPaper00004883
MethodSubstitution_allele