WormBase Tree Display for Variation: WBVar00002600
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WBVar00002600 | Name | Public_name | WBVar00002600 | ||
---|---|---|---|---|---|
Other_name | haw81618 | ||||
cewivar00047074 | |||||
C29A12.4l.1:c.276-141A>T | |||||
C29A12.4b.1:c.276-141A>T | |||||
C29A12.4k.1:c.276-141A>T | |||||
C29A12.4a.1:c.276-141A>T | |||||
HGVSg | CHROMOSOME_V:g.10825547A>T | ||||
Sequence_details | SMap | S_parent | Sequence | C29A12 | |
Flanking_sequences | agattttgactttcaaaaaataatt | aaaaaaaaaacatttaacacgaata | |||
Mapping_target | C29A12 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Hawaiian_Waterston | |||||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00007799 | |||
Transcript | C29A12.4l.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C29A12.4l.1:c.276-141A>T | ||||
Intron_number | 2/27 | ||||
C29A12.4k.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C29A12.4k.1:c.276-141A>T | ||||
Intron_number | 2/28 | ||||
C29A12.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C29A12.4a.1:c.276-141A>T | ||||
Intron_number | 3/28 | ||||
C29A12.4b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C29A12.4b.1:c.276-141A>T | ||||
Intron_number | 3/29 | ||||
Remark | [20081124 db] this Variation was previously named hw81618 | ||||
Method | WGS_Hawaiian_Waterston |