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WormBase Tree Display for Variation: WBVar00009678

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Name Class

WBVar00009678EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00009678
Other_namehaw33058
cewivar00188565
Y54G9A.3c.1:c.1038-17T>G
Y54G9A.3b.1:c.1149-17T>G
Y54G9A.3a.1:c.1161-17T>G
Y54G9A.3a.2:c.1161-17T>G
HGVSgCHROMOSOME_II:g.13711249T>G
Sequence_detailsSMapS_parentSequenceY54G9A
Flanking_sequencesttgccgccacaaatttttgtgtcctatcagaatttttatagatcaagcct
Mapping_targetY54G9A
Type_of_mutationSubstitutionTG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01382686
StatusLive
AffectsGeneWBGene00002235
TranscriptY54G9A.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G9A.3a.1:c.1161-17T>G
Intron_number6/9
Y54G9A.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G9A.3b.1:c.1149-17T>G
Intron_number5/7
Y54G9A.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G9A.3c.1:c.1038-17T>G
Intron_number5/8
Y54G9A.3a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G9A.3a.2:c.1161-17T>G
Intron_number7/10
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw33058
MethodWGS_Hawaiian_Waterston