WormBase Tree Display for Variation: WBVar00017779

WBVar00017779 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00017779
    Other_name: cbs16170
      cb16170 Paper_evidence: WBPaper00055507
    HGVSg: chrIV:g.12102648C>T
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc0081
    Flanking_sequences: gtccttggagatctgaaaaagagaa gcgattgttaataaatgtgcaaaaa
    Mapping_target: cb25.fpc0081
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: CGCG AccII, Bsh1236I, BstFNI, BstUI, FnuDII, MvnI, SelI, ThaI 501 499
      Polymorphic_strain_digest: CGCG AccII, Bsh1236I, BstFNI, BstUI, FnuDII, MvnI, SelI, ThaI 1000
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00027093
    Transcript: CBG04423a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG04423a.1:c.8542-14G>A
        Intron_number: 11/16
      CBG04423b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG04423b.1:c.8569-14G>A
        Intron_number: 11/16
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: CrossMatch, Polybayes, ssaha-SNP v1.0, ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP