WormBase Tree Display for Variation: WBVar00020301
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| WBVar00020301 | Name | Public_name | WBVar00020301 | ||
|---|---|---|---|---|---|
| Other_name | pas15657 | ||||
| cewivar00019347 | |||||
| CE26979:p.Pro309= | |||||
| R06B10.3.1:c.927G>T | |||||
| HGVSg | CHROMOSOME_III:g.1006008G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | CHROMOSOME_III | |
| Flanking_sequences | aaactgtatttaggttttcttattattttttagttaaaacttgaaaaatagggtaattaattcgtttcacatcaactttttcgattttatttgaaattaattttcacagatagctatgatatttttgcaacttttaatctataatttagctaaaacatctcaaaaactagaaaaactttaaaactcaaattttagcgcaataaccggtgctcaaaagtttcggtgggtcccatcgatgaacaacatcggctacactacgttggtatttttgacggctcgccgcgatttttccggaattcc | tcacttttccagccattcccaaagttcgatgaagtcgtcgtaatatccttgaatggtatgggttactgtagttgagttgcaggtgattacggtagtttcagggtcccaaatgccaggaatcccggctggagtcaaaaatgtcgcggtttcgaatgatttcagcagtacggatattcaaaatgttatcaatgttttaaaatgtcattaatttttaataaatttgactattttaccatagaattcgaaaaatgttgtcctaaattagtttcctcgtcggtttttcaagtttttcacctaaaa | |||
| Mapping_target | CHROMOSOME_III | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (17) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00019914 | |||
| Transcript | R06B10.3.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | R06B10.3.1:c.927G>T | ||||
| HGVSp | CE26979:p.Pro309= | ||||
| cDNA_position | 947 | ||||
| CDS_position | 927 | ||||
| Protein_position | 309 | ||||
| Exon_number | 9/11 | ||||
| Codon_change | ccG/ccT | ||||
| Amino_acid_change | P | ||||
| Method | WGS_Pasadena_Quinlan |
