WormBase Tree Display for Variation: WBVar00029978

WBVar00029978 Name: Public_name: WBVar00029978
    Other_name: snp_Y55B1BM[2]
      haw37118
      cewivar00192168
      Y55B1BM.1a.1:c.352-91C>T
      Y55B1BM.1c.1:c.352-91C>T
      Y55B1BM.1b.1:c.352-91C>T
    HGVSg: CHROMOSOME_III:g.417281G>A
  Sequence_details: SMap: S_parent: Sequence: Y55B1BM
    Flanking_sequences: gtgagaaatctttggaatgaaaaat gcatatttcccaggttttcgggtgg
    Mapping_target: Y55B1BM
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
          WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
      SNP_Wicks
    History: Acquires_merge: WBVar01389050
        WBVar00247679
    Status: Live
  Affects: Gene: WBGene00021910
    Transcript: Y55B1BM.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55B1BM.1a.1:c.352-91C>T
        Intron_number: 4/13
      Y55B1BM.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55B1BM.1c.1:c.352-91C>T
        Intron_number: 4/9
      Y55B1BM.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55B1BM.1b.1:c.352-91C>T
        Intron_number: 4/12
  Reference: WBPaper00004703
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw37118
  Method: WGS_Hawaiian_Waterston