WormBase Tree Display for Variation: WBVar00033283
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WBVar00033283 | Name | Public_name | WBVar00033283 | ||
---|---|---|---|---|---|
Other_name | haw37779 | ||||
cewivar00377340 | |||||
T12B5.1.1:c.561C>T | |||||
CE20059:p.Asp187= | |||||
HGVSg | CHROMOSOME_III:g.963102C>T | ||||
Sequence_details | SMap | S_parent | Sequence | T12B5 | |
Flanking_sequences | ccttggaatatgttgcgtcaaatga | caattcgaacaaataacccatttgg | |||
Mapping_target | T12B5 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00020448 | |||
Transcript | T12B5.1.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | T12B5.1.1:c.561C>T | ||||
HGVSp | CE20059:p.Asp187= | ||||
cDNA_position | 596 | ||||
CDS_position | 561 | ||||
Protein_position | 187 | ||||
Exon_number | 3/5 | ||||
Codon_change | gaC/gaT | ||||
Amino_acid_change | D | ||||
Remark | [20081124 db] this Variation was previously named hw37779 | ||||
Method | WGS_Hawaiian_Waterston |