WormBase Tree Display for Variation: WBVar00046368

WBVar00046368 Name: Public_name: WBVar00046368
    Other_name: snp_Y54F10BM[2]
      haw40396
      cewivar00194911
      Y54F10BM.7.1:c.*67-111T>A
      Y54F10BM.5.1:c.583+65A>T
    HGVSg: CHROMOSOME_III:g.2267386A>T
  Sequence_details: SMap: S_parent: Sequence: Y54F10BM
    Flanking_sequences: acggaatatgactgtataaaatttt aaaaaaaaatgctctaaatcctctc
    Mapping_target: Y54F10BM
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
      WBStrain00006640 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022850 From_analysis: WGS_De_Bono
          Million_mutation_project_reanalysis
      WBStrain00022930 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
      SNP_Wicks
    History: Acquires_merge: WBVar00247605
        WBVar01327275
    Status: Live
  Affects: Gene: WBGene00021862
      WBGene00021860
    Transcript: Y54F10BM.5.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54F10BM.5.1:c.583+65A>T
        Intron_number: 3/5
      Y54F10BM.7.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54F10BM.7.1:c.*67-111T>A
        Intron_number: 6/6
  Reference: WBPaper00004703
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw40396
  Method: WGS_Hawaiian_Waterston