WormBase Tree Display for Variation: WBVar00046518

WBVar00046518 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00046518
    Other_name: pas2230
      haw40426
      cewivar00194929
      Y54F10BM.2.1:c.1799-171T>C
    HGVSg: CHROMOSOME_III:g.2320968T>C
  Sequence_details: SMap: S_parent: Sequence: Y54F10BM
    Flanking_sequences: gcattgaataaaatcgagaaaactt gaaaaacctctaaaatggattaatt
    Mapping_target: Y54F10BM
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
      WBStrain00004604 From_analysis: WGS_Pasadena_Quinlan
      WBStrain00006622 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006642 From_analysis: WGS_De_Bono
      WBStrain00022850 From_analysis: WGS_De_Bono
          Million_mutation_project_reanalysis
      WBStrain00022852 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022886 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023286 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027652 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson6900
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar01259201
        WBVar00097371
        WBVar01327318
    Status: Live
  Affects: Gene: WBGene00021857
    Transcript: Y54F10BM.2.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54F10BM.2.1:c.1799-171T>C
        Intron_number: 6/11
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw40426
  Method: WGS_Hawaiian_Waterston