WormBase Tree Display for Variation: WBVar00057125
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| WBVar00057125 | Name | Public_name | WBVar00057125 | ||
|---|---|---|---|---|---|
| Other_name | pas23022 | ||||
| cewivar00106804 | |||||
| F47D12.1c.1:c.156+463C>T | |||||
| F47D12.1d.1:c.156+463C>T | |||||
| F47D12.1b.1:c.156+463C>T | |||||
| F47D12.1a.1:c.156+463C>T | |||||
| HGVSg | CHROMOSOME_III:g.6310039C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F47D12 | |
| Flanking_sequences | accttttggaattgatattaggaaggaaatattgtgcattcaagcatacttgcatcaaaacttgattaaagcaaattttgggaaacattagagcccaatgtcagcaagaactaataaaaaatggagtcatgggtggaaaaatgtttcaaatcaatactagttttaaaatttcgaaaatttcaatatgaaaaaaatttcgtacacaatttctttttattggagaacaacggttcttgatgagtcttccggtaggaaggaattggaactaccattattaaattgaccgcatagaactgtaga | agtctgttttggagacggacatgagttttattttttccgaaggttttcctgaaacttgctcagtcgttttcaattcagtttgtgtgaccgagatttatcatattcgcatccacttcgttgtacgacagccgcgaaaaaattatcccgtcttccaaaaaggattcgaactttcgatttctgatatccgacccaaccttctctgtaaccatgatattttttctgaggaccctggcgccctctaaaaagtttgacggttttgtatgaagatgttgtgctgggtgatgtctctcgagacctcaa | |||
| Mapping_target | F47D12 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00001518 | |||
| Transcript | F47D12.1d.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F47D12.1d.1:c.156+463C>T | ||||
| Intron_number | 1/4 | ||||
| F47D12.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F47D12.1b.1:c.156+463C>T | ||||
| Intron_number | 2/12 | ||||
| F47D12.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F47D12.1a.1:c.156+463C>T | ||||
| Intron_number | 2/13 | ||||
| F47D12.1c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F47D12.1c.1:c.156+463C>T | ||||
| Intron_number | 2/12 | ||||
| Method | WGS_Pasadena_Quinlan |
