WormBase Tree Display for Variation: WBVar00074024
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WBVar00074024 | Name | Public_name | WBVar00074024 | ||
---|---|---|---|---|---|
Other_name | pas10718 | ||||
haw98384 | |||||
cewivar00056128 | |||||
F25C8.3b.1:c.4792-93A>T | |||||
F25C8.3a.1:c.4819-93A>T | |||||
F25C8.3e.1:c.4660-93A>T | |||||
F25C8.3c.1:c.4765-93A>T | |||||
F25C8.3d.1:c.4933-93A>T | |||||
HGVSg | CHROMOSOME_V:g.20891625A>T | ||||
Sequence_details | SMap | S_parent | Sequence | F25C8 | |
Flanking_sequences | atatgttctcaccactagttttttt | aaacttattgatgatattttgaaaa | |||
Mapping_target | F25C8 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (33) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar00105859 | |||
Status | Live | ||||
Affects | Gene | WBGene00006812 | |||
Transcript | F25C8.3d.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F25C8.3d.1:c.4933-93A>T | ||||
Intron_number | 23/36 | ||||
F25C8.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F25C8.3b.1:c.4792-93A>T | ||||
Intron_number | 22/35 | ||||
F25C8.3e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F25C8.3e.1:c.4660-93A>T | ||||
Intron_number | 20/33 | ||||
F25C8.3c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F25C8.3c.1:c.4765-93A>T | ||||
Intron_number | 22/34 | ||||
F25C8.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F25C8.3a.1:c.4819-93A>T | ||||
Intron_number | 22/36 | ||||
Remark | [20081124 db] this Variation was previously named hw98384 | ||||
Method | WGS_Hawaiian_Waterston |