WormBase Tree Display for Variation: WBVar00074028
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| WBVar00074028 | Name | Public_name | WBVar00074028 | ||
|---|---|---|---|---|---|
| Other_name | haw98388 | ||||
| cewivar00267494 | |||||
| F25C8.3e.1:c.9400+8C>T | |||||
| F25C8.3c.1:c.9505+8C>T | |||||
| F25C8.3a.1:c.9595+8C>T | |||||
| F25C8.3d.1:c.9709+8C>T | |||||
| F25C8.3b.1:c.9532+8C>T | |||||
| HGVSg | CHROMOSOME_V:g.20898119C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F25C8 | |
| Flanking_sequences | atacaaatagacatagatgtaagcg | taacgtcattatgttgttcgagtgt | |||
| Mapping_target | F25C8 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006812 | |||
| Transcript | F25C8.3d.1 | VEP_consequence | splice_region_variant,intron_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F25C8.3d.1:c.9709+8C>T | ||||
| Intron_number | 36/36 | ||||
| F25C8.3b.1 | VEP_consequence | splice_region_variant,intron_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F25C8.3b.1:c.9532+8C>T | ||||
| Intron_number | 34/35 | ||||
| F25C8.3e.1 | VEP_consequence | splice_region_variant,intron_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F25C8.3e.1:c.9400+8C>T | ||||
| Intron_number | 32/33 | ||||
| F25C8.3c.1 | VEP_consequence | splice_region_variant,intron_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F25C8.3c.1:c.9505+8C>T | ||||
| Intron_number | 34/34 | ||||
| F25C8.3a.1 | VEP_consequence | splice_region_variant,intron_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F25C8.3a.1:c.9595+8C>T | ||||
| Intron_number | 35/36 | ||||
| Remark | [20081124 db] this Variation was previously named hw98388 | ||||
| Method | WGS_Hawaiian_Waterston |
