WormBase Tree Display for Variation: WBVar00082625
expand all nodes | collapse all nodes | view schema
WBVar00082625 | Name | Public_name | WBVar00082625 | ||
---|---|---|---|---|---|
Other_name | haw106985 | ||||
cewivar00275641 | |||||
F57C7.4.1:c.1896T>C | |||||
CE43146:p.Ala632= | |||||
HGVSg | CHROMOSOME_X:g.10585806A>G | ||||
Sequence_details | SMap | S_parent | Sequence | F57C7 | |
Flanking_sequences | aatatttctacctgatataatcaaa | gcattttgttttttctctgcgagtc | |||
Mapping_target | F57C7 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00010200 | |||
Transcript | F57C7.4.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F57C7.4.1:c.1896T>C | ||||
HGVSp | CE43146:p.Ala632= | ||||
cDNA_position | 1923 | ||||
CDS_position | 1896 | ||||
Protein_position | 632 | ||||
Exon_number | 14/32 | ||||
Codon_change | gcT/gcC | ||||
Amino_acid_change | A | ||||
Remark | [20081124 db] this Variation was previously named hw106985 | ||||
Method | WGS_Hawaiian_Waterston |