WormBase Tree Display for Variation: WBVar00085551
expand all nodes | collapse all nodes | view schema
WBVar00085551 | Name | Public_name | WBVar00085551 | ||
---|---|---|---|---|---|
Other_name | haw109911 | ||||
cewivar00277226 | |||||
CE05227:p.Thr58= | |||||
C05G5.4.1:c.174T>C | |||||
HGVSg | CHROMOSOME_X:g.14754547T>C | ||||
Sequence_details | SMap | S_parent | Sequence | C05G5 | |
Flanking_sequences | gaaagcaaatgctcgagtacaacac | aaagtcgtcggtggagtaaatgcca | |||
Mapping_target | C05G5 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00007350 | |||
Transcript | C05G5.4.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | C05G5.4.1:c.174T>C | ||||
HGVSp | CE05227:p.Thr58= | ||||
cDNA_position | 180 | ||||
CDS_position | 174 | ||||
Protein_position | 58 | ||||
Exon_number | 4/8 | ||||
Codon_change | acT/acC | ||||
Amino_acid_change | T | ||||
Remark | [20081124 db] this Variation was previously named hw109911 | ||||
Method | WGS_Hawaiian_Waterston |